Gene : Sobic.001G214800 S. bicolor v3.1.1
Defline:  (1 of 1) K12824 - transcription elongation regulator 1 (TCERG1, CA150) Genomic Order:  2234
Name:  ? Sobic.001G214800 Secondary Identifier:  ? PAC:37940027
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G214800 0.5kb upstream 0.5kb upstream 10883 true Chr01: 19793944-19804826 Sorghum bicolor
Sobic.001G214800 0.5kb upstream 0.5kb upstream 500 false Chr01: 19793944-19794443 Sorghum bicolor
Sobic.001G214800 0.5kb downstream 0.5kb downstream 10883 true Chr01: 19794444-19805326 Sorghum bicolor
Sobic.001G214800 0.5kb downstream 0.5kb downstream 500 false Chr01: 19804827-19805326 Sorghum bicolor
Sobic.001G214800 1.0kb upstream 1.0kb upstream 11383 true Chr01: 19793444-19804826 Sorghum bicolor
Sobic.001G214800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 19793444-19794443 Sorghum bicolor
Sobic.001G214800 1.0kb downstream 1.0kb downstream 11383 true Chr01: 19794444-19805826 Sorghum bicolor
Sobic.001G214800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 19804827-19805826 Sorghum bicolor
Sobic.001G214800 2.0kb upstream 2.0kb upstream 12383 true Chr01: 19792444-19804826 Sorghum bicolor
Sobic.001G214800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 19792444-19794443 Sorghum bicolor
Sobic.001G214800 2.0kb downstream 2.0kb downstream 12383 true Chr01: 19794444-19806826 Sorghum bicolor
Sobic.001G214800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 19804827-19806826 Sorghum bicolor
Sobic.001G214800 5.0kb upstream 5.0kb upstream 15383 true Chr01: 19789444-19804826 Sorghum bicolor
Sobic.001G214800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 19789444-19794443 Sorghum bicolor
Sobic.001G214800 5.0kb downstream 5.0kb downstream 15383 true Chr01: 19794444-19809826 Sorghum bicolor
Sobic.001G214800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 19804827-19809826 Sorghum bicolor
Sobic.001G214800 10.0kb upstream 10.0kb upstream 20383 true Chr01: 19784444-19804826 Sorghum bicolor
Sobic.001G214800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 19784444-19794443 Sorghum bicolor
Sobic.001G214800 10.0kb downstream 10.0kb downstream 20383 true Chr01: 19794444-19814826 Sorghum bicolor
Sobic.001G214800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 19804827-19814826 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182407 5267 Panicoideae View MSA
124580566 5269 Grass View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.049        
cufflinks 1.289       Low
cufflinks 1.742       Low
cufflinks 2.431        
cufflinks 4.24        
cufflinks 3.317        
cufflinks 2.811        
cufflinks 1.352       Low
cufflinks 4.765       High
cufflinks 4.551       High
cufflinks 3.254        
cufflinks 3.938        
cufflinks 3.358        
cufflinks 2.912        
cufflinks 3.36        
cufflinks 2.027       Low
cufflinks 2.661        
cufflinks 2.871        
cufflinks 3.936        
cufflinks 3.008        
cufflinks 6.114       High
cufflinks 3.405        
cufflinks 3.3        
cufflinks 3.305        
cufflinks 2.298        
cufflinks 1.205       Low
cufflinks 3.028        
cufflinks 2.419        
cufflinks 2.782        
cufflinks 4.062        

0 Strain