Gene : Sobic.006G010000 S. bicolor v3.1.1
Defline:  (1 of 2) K17616 - CTD small phosphatase-like protein 2 [EC:3.1.3.-] (CTDSPL2) Genomic Order:  107
Name:  ? Sobic.006G010000 Secondary Identifier:  ? PAC:37946181
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G010000 0.5kb upstream 0.5kb upstream 7467 true Chr06: 1453202-1460668 Sorghum bicolor
Sobic.006G010000 0.5kb upstream 0.5kb upstream 500 false Chr06: 1453202-1453701 Sorghum bicolor
Sobic.006G010000 0.5kb downstream 0.5kb downstream 7467 true Chr06: 1453702-1461168 Sorghum bicolor
Sobic.006G010000 0.5kb downstream 0.5kb downstream 500 false Chr06: 1460669-1461168 Sorghum bicolor
Sobic.006G010000 1.0kb upstream 1.0kb upstream 7967 true Chr06: 1452702-1460668 Sorghum bicolor
Sobic.006G010000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1452702-1453701 Sorghum bicolor
Sobic.006G010000 1.0kb downstream 1.0kb downstream 7967 true Chr06: 1453702-1461668 Sorghum bicolor
Sobic.006G010000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1460669-1461668 Sorghum bicolor
Sobic.006G010000 2.0kb upstream 2.0kb upstream 8967 true Chr06: 1451702-1460668 Sorghum bicolor
Sobic.006G010000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1451702-1453701 Sorghum bicolor
Sobic.006G010000 2.0kb downstream 2.0kb downstream 8967 true Chr06: 1453702-1462668 Sorghum bicolor
Sobic.006G010000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1460669-1462668 Sorghum bicolor
Sobic.006G010000 5.0kb upstream 5.0kb upstream 11967 true Chr06: 1448702-1460668 Sorghum bicolor
Sobic.006G010000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1448702-1453701 Sorghum bicolor
Sobic.006G010000 5.0kb downstream 5.0kb downstream 11967 true Chr06: 1453702-1465668 Sorghum bicolor
Sobic.006G010000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1460669-1465668 Sorghum bicolor
Sobic.006G010000 10.0kb upstream 10.0kb upstream 16967 true Chr06: 1443702-1460668 Sorghum bicolor
Sobic.006G010000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1443702-1453701 Sorghum bicolor
Sobic.006G010000 10.0kb downstream 10.0kb downstream 16967 true Chr06: 1453702-1470668 Sorghum bicolor
Sobic.006G010000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1460669-1470668 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180115 5267 Panicoideae View MSA
124585738 5269 Grass View MSA
122048249 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121310904 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.199        
cufflinks 1.747       Low
cufflinks 4.026       Low
cufflinks 8.068        
cufflinks 10.533       High
cufflinks 4.597        
cufflinks 6.419        
cufflinks 3.362       Low
cufflinks 8.364        
cufflinks 9.912        
cufflinks 6.676        
cufflinks 9.167        
cufflinks 7.409        
cufflinks 7.065        
cufflinks 6.691        
cufflinks 3.69       Low
cufflinks 6.756        
cufflinks 6.96        
cufflinks 3.01       Low
cufflinks 7.965        
cufflinks 14.904     High High
cufflinks 6.088        
cufflinks 8.463        
cufflinks 7.952        
cufflinks 3.923       Low
cufflinks 1.832       Low
cufflinks 7.346        
cufflinks 11.399     High High
cufflinks 5.459        
cufflinks 8.795        

0 Strain