Gene : Sobic.002G227500 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11141//PTHR11141:SF9 - PROTEIN TRANSPORT PROTEIN SEC23 // SUBFAMILY NOT NAMED Genomic Order:  2330
Name:  ? Sobic.002G227500 Secondary Identifier:  ? PAC:37951450
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G227500 0.5kb upstream 0.5kb upstream 8804 true Chr02: 61936020-61944823 Sorghum bicolor
Sobic.002G227500 0.5kb upstream 0.5kb upstream 500 false Chr02: 61936020-61936519 Sorghum bicolor
Sobic.002G227500 0.5kb downstream 0.5kb downstream 8804 true Chr02: 61936520-61945323 Sorghum bicolor
Sobic.002G227500 0.5kb downstream 0.5kb downstream 500 false Chr02: 61944824-61945323 Sorghum bicolor
Sobic.002G227500 1.0kb upstream 1.0kb upstream 9304 true Chr02: 61935520-61944823 Sorghum bicolor
Sobic.002G227500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 61935520-61936519 Sorghum bicolor
Sobic.002G227500 1.0kb downstream 1.0kb downstream 9304 true Chr02: 61936520-61945823 Sorghum bicolor
Sobic.002G227500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 61944824-61945823 Sorghum bicolor
Sobic.002G227500 2.0kb upstream 2.0kb upstream 10304 true Chr02: 61934520-61944823 Sorghum bicolor
Sobic.002G227500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 61934520-61936519 Sorghum bicolor
Sobic.002G227500 2.0kb downstream 2.0kb downstream 10304 true Chr02: 61936520-61946823 Sorghum bicolor
Sobic.002G227500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 61944824-61946823 Sorghum bicolor
Sobic.002G227500 5.0kb upstream 5.0kb upstream 13304 true Chr02: 61931520-61944823 Sorghum bicolor
Sobic.002G227500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 61931520-61936519 Sorghum bicolor
Sobic.002G227500 5.0kb downstream 5.0kb downstream 13304 true Chr02: 61936520-61949823 Sorghum bicolor
Sobic.002G227500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 61944824-61949823 Sorghum bicolor
Sobic.002G227500 10.0kb upstream 10.0kb upstream 18304 true Chr02: 61926520-61944823 Sorghum bicolor
Sobic.002G227500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 61926520-61936519 Sorghum bicolor
Sobic.002G227500 10.0kb downstream 10.0kb downstream 18304 true Chr02: 61936520-61954823 Sorghum bicolor
Sobic.002G227500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 61944824-61954823 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177392 5267 Panicoideae View MSA
124586474 5269 Grass View MSA
122045932 5273 Angiosperm View MSA
121348482 5274 Embryophyte View MSA
123424383 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.006        
cufflinks 1.206       Low
cufflinks 3.349        
cufflinks 4.221        
cufflinks 6.513        
cufflinks 4.329        
cufflinks 3.58        
cufflinks 1.46       Low
cufflinks 6.495        
cufflinks 6.319        
cufflinks 5.754        
cufflinks 5.602        
cufflinks 4.002        
cufflinks 4.505        
cufflinks 4.538        
cufflinks 2.543        
cufflinks 3.469        
cufflinks 3.774        
cufflinks 3.441        
cufflinks 4.299        
cufflinks 7.101       High
cufflinks 7.296       High
cufflinks 6.067        
cufflinks 6.314        
cufflinks 2.612        
cufflinks 1.482       Low
cufflinks 4.46        
cufflinks 1.412       Low
cufflinks 3.694        
cufflinks 5.666        

0 Strain