Gene : Sobic.010G053600 S. bicolor v3.1.1
Defline:  (1 of 1) K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) Genomic Order:  546
Name:  ? Sobic.010G053600 Secondary Identifier:  ? PAC:37911506
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G053600 0.5kb upstream 0.5kb upstream 10447   true Chr10: 4198395-4208841 Sorghum bicolor
Sobic.010G053600 0.5kb upstream 0.5kb upstream 500   false Chr10: 4208342-4208841 Sorghum bicolor
Sobic.010G053600 0.5kb downstream 0.5kb downstream 10447   true Chr10: 4197895-4208341 Sorghum bicolor
Sobic.010G053600 0.5kb downstream 0.5kb downstream 500   false Chr10: 4197895-4198394 Sorghum bicolor
Sobic.010G053600 1.0kb upstream 1.0kb upstream 10947   true Chr10: 4198395-4209341 Sorghum bicolor
Sobic.010G053600 1.0kb upstream 1.0kb upstream 1000   false Chr10: 4208342-4209341 Sorghum bicolor
Sobic.010G053600 1.0kb downstream 1.0kb downstream 10947   true Chr10: 4197395-4208341 Sorghum bicolor
Sobic.010G053600 1.0kb downstream 1.0kb downstream 1000   false Chr10: 4197395-4198394 Sorghum bicolor
Sobic.010G053600 2.0kb upstream 2.0kb upstream 11947   true Chr10: 4198395-4210341 Sorghum bicolor
Sobic.010G053600 2.0kb upstream 2.0kb upstream 2000   false Chr10: 4208342-4210341 Sorghum bicolor
Sobic.010G053600 2.0kb downstream 2.0kb downstream 11947   true Chr10: 4196395-4208341 Sorghum bicolor
Sobic.010G053600 2.0kb downstream 2.0kb downstream 2000   false Chr10: 4196395-4198394 Sorghum bicolor
Sobic.010G053600 5.0kb upstream 5.0kb upstream 14947   true Chr10: 4198395-4213341 Sorghum bicolor
Sobic.010G053600 5.0kb upstream 5.0kb upstream 5000   false Chr10: 4208342-4213341 Sorghum bicolor
Sobic.010G053600 5.0kb downstream 5.0kb downstream 14947   true Chr10: 4193395-4208341 Sorghum bicolor
Sobic.010G053600 5.0kb downstream 5.0kb downstream 5000   false Chr10: 4193395-4198394 Sorghum bicolor
Sobic.010G053600 10.0kb upstream 10.0kb upstream 19947   true Chr10: 4198395-4218341 Sorghum bicolor
Sobic.010G053600 10.0kb upstream 10.0kb upstream 10000   false Chr10: 4208342-4218341 Sorghum bicolor
Sobic.010G053600 10.0kb downstream 10.0kb downstream 19947   true Chr10: 4188395-4208341 Sorghum bicolor
Sobic.010G053600 10.0kb downstream 10.0kb downstream 10000   false Chr10: 4188395-4198394 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190790 5267 Panicoideae View MSA
124570659 5269 Grass View MSA
122042233 5273 Angiosperm View MSA
121346316 5274 Embryophyte View MSA
123424107 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.058     High  
cufflinks 9.807     High Low
cufflinks 18.017     High Low
cufflinks 22.607     High  
cufflinks 76.297     High  
cufflinks 22.452     High  
cufflinks 48.672     High  
cufflinks 12.085     High Low
cufflinks 46.8     High  
cufflinks 42.3     High  
cufflinks 70.765     High  
cufflinks 85.332     High High
cufflinks 35.425     High  
cufflinks 63.083     High  
cufflinks 43.738     High  
cufflinks 18.842     High Low
cufflinks 45.811     High  
cufflinks 49.143     High  
cufflinks 27.243     High  
cufflinks 43.748     High  
cufflinks 143.068     High High
cufflinks 64.415     High  
cufflinks 78.664     High  
cufflinks 81.737     High High
cufflinks 20.616     High  
cufflinks 9.26     High Low
cufflinks 56.819     High  
cufflinks 43.32     High  
cufflinks 25.765     High  
cufflinks 59.688     High  

0 Strain