Gene : Sobic.007G031600 S. bicolor v3.1.1
Defline:  (1 of 42) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  325
Name:  ? Sobic.007G031600 Secondary Identifier:  ? PAC:37937289
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G031600 0.5kb upstream 0.5kb upstream 7244 true Chr07: 2811163-2818406 Sorghum bicolor
Sobic.007G031600 0.5kb upstream 0.5kb upstream 500 false Chr07: 2811163-2811662 Sorghum bicolor
Sobic.007G031600 0.5kb downstream 0.5kb downstream 7244 true Chr07: 2811663-2818906 Sorghum bicolor
Sobic.007G031600 0.5kb downstream 0.5kb downstream 500 false Chr07: 2818407-2818906 Sorghum bicolor
Sobic.007G031600 1.0kb upstream 1.0kb upstream 7744 true Chr07: 2810663-2818406 Sorghum bicolor
Sobic.007G031600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2810663-2811662 Sorghum bicolor
Sobic.007G031600 1.0kb downstream 1.0kb downstream 7744 true Chr07: 2811663-2819406 Sorghum bicolor
Sobic.007G031600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2818407-2819406 Sorghum bicolor
Sobic.007G031600 2.0kb upstream 2.0kb upstream 8744 true Chr07: 2809663-2818406 Sorghum bicolor
Sobic.007G031600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2809663-2811662 Sorghum bicolor
Sobic.007G031600 2.0kb downstream 2.0kb downstream 8744 true Chr07: 2811663-2820406 Sorghum bicolor
Sobic.007G031600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2818407-2820406 Sorghum bicolor
Sobic.007G031600 5.0kb upstream 5.0kb upstream 11744 true Chr07: 2806663-2818406 Sorghum bicolor
Sobic.007G031600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2806663-2811662 Sorghum bicolor
Sobic.007G031600 5.0kb downstream 5.0kb downstream 11744 true Chr07: 2811663-2823406 Sorghum bicolor
Sobic.007G031600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2818407-2823406 Sorghum bicolor
Sobic.007G031600 10.0kb upstream 10.0kb upstream 16744 true Chr07: 2801663-2818406 Sorghum bicolor
Sobic.007G031600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2801663-2811662 Sorghum bicolor
Sobic.007G031600 10.0kb downstream 10.0kb downstream 16744 true Chr07: 2811663-2828406 Sorghum bicolor
Sobic.007G031600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2818407-2828406 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176722 5267 Panicoideae View MSA
124573777 5269 Grass View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.44        
cufflinks 2.974       Low
cufflinks 5.707        
cufflinks 5.706        
cufflinks 8.767        
cufflinks 5.216        
cufflinks 6.603        
cufflinks 2.85       Low
cufflinks 8.871        
cufflinks 9.604        
cufflinks 8.248        
cufflinks 10.451        
cufflinks 7.662        
cufflinks 8.871        
cufflinks 7.939        
cufflinks 5.195        
cufflinks 6.398        
cufflinks 6.55        
cufflinks 7.228        
cufflinks 7.93        
cufflinks 16.099     High High
cufflinks 8.074        
cufflinks 8.972        
cufflinks 9.523        
cufflinks 5.172        
cufflinks 2.447       Low
cufflinks 7.456        
cufflinks 10.036     High  
cufflinks 4.382       Low
cufflinks 10.366        

0 Strain