Gene : VIT_201s0026g00050 V. vinifera v2.1

Defline:  (1 of 3) K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) Genomic Order:  825
Name:  ? VIT_201s0026g00050 Secondary Identifier:  ? PAC:38027270

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_201s0026g00050 0.5kb upstream 0.5kb upstream 3133 true chr1: 8677462-8680594 Vitis vinifera
VIT_201s0026g00050 0.5kb upstream 0.5kb upstream 500 false chr1: 8677462-8677961 Vitis vinifera
VIT_201s0026g00050 0.5kb downstream 0.5kb downstream 3133 true chr1: 8677962-8681094 Vitis vinifera
VIT_201s0026g00050 0.5kb downstream 0.5kb downstream 500 false chr1: 8680595-8681094 Vitis vinifera
VIT_201s0026g00050 1.0kb upstream 1.0kb upstream 3633 true chr1: 8676962-8680594 Vitis vinifera
VIT_201s0026g00050 1.0kb upstream 1.0kb upstream 1000 false chr1: 8676962-8677961 Vitis vinifera
VIT_201s0026g00050 1.0kb downstream 1.0kb downstream 3633 true chr1: 8677962-8681594 Vitis vinifera
VIT_201s0026g00050 1.0kb downstream 1.0kb downstream 1000 false chr1: 8680595-8681594 Vitis vinifera
VIT_201s0026g00050 2.0kb upstream 2.0kb upstream 4633 true chr1: 8675962-8680594 Vitis vinifera
VIT_201s0026g00050 2.0kb upstream 2.0kb upstream 2000 false chr1: 8675962-8677961 Vitis vinifera
VIT_201s0026g00050 2.0kb downstream 2.0kb downstream 4633 true chr1: 8677962-8682594 Vitis vinifera
VIT_201s0026g00050 2.0kb downstream 2.0kb downstream 2000 false chr1: 8680595-8682594 Vitis vinifera
VIT_201s0026g00050 5.0kb upstream 5.0kb upstream 7633 true chr1: 8672962-8680594 Vitis vinifera
VIT_201s0026g00050 5.0kb upstream 5.0kb upstream 5000 false chr1: 8672962-8677961 Vitis vinifera
VIT_201s0026g00050 5.0kb downstream 5.0kb downstream 7633 true chr1: 8677962-8685594 Vitis vinifera
VIT_201s0026g00050 5.0kb downstream 5.0kb downstream 5000 false chr1: 8680595-8685594 Vitis vinifera
VIT_201s0026g00050 10.0kb upstream 10.0kb upstream 12633 true chr1: 8667962-8680594 Vitis vinifera
VIT_201s0026g00050 10.0kb upstream 10.0kb upstream 10000 false chr1: 8667962-8677961 Vitis vinifera
VIT_201s0026g00050 10.0kb downstream 10.0kb downstream 12633 true chr1: 8677962-8690594 Vitis vinifera
VIT_201s0026g00050 10.0kb downstream 10.0kb downstream 10000 false chr1: 8680595-8690594 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065414 5270 Rosid View MSA
123740690 5271 Pentapetalae View MSA
122787851 5272 Eudicot View MSA
122043195 5273 Angiosperm View MSA
123429187 5275 Viridiplantae View MSA
121346291 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain