Gene : Lsat_1_v5_gn_0_44400 L. sativa V8
Defline:  (1 of 1) K00412 - ubiquinol-cytochrome c reductase cytochrome b subunit (CYTB, petB) Genomic Order:  85
Name:  ? Lsat_1_v5_gn_0_44400 Secondary Identifier:  ? PAC:38935493
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-3781 Lactuca sativa pathologic  
Lsativa PWY-7279 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_44400 0.5kb upstream 0.5kb upstream 2389   true Lsat_1_v8_lg_0: 11241920-11244308 Lactuca sativa
Lsat_1_v5_gn_0_44400 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 11241920-11242419 Lactuca sativa
Lsat_1_v5_gn_0_44400 0.5kb downstream 0.5kb downstream 2389   true Lsat_1_v8_lg_0: 11242420-11244808 Lactuca sativa
Lsat_1_v5_gn_0_44400 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 11244309-11244808 Lactuca sativa
Lsat_1_v5_gn_0_44400 1.0kb upstream 1.0kb upstream 2889   true Lsat_1_v8_lg_0: 11241420-11244308 Lactuca sativa
Lsat_1_v5_gn_0_44400 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 11241420-11242419 Lactuca sativa
Lsat_1_v5_gn_0_44400 1.0kb downstream 1.0kb downstream 2889   true Lsat_1_v8_lg_0: 11242420-11245308 Lactuca sativa
Lsat_1_v5_gn_0_44400 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 11244309-11245308 Lactuca sativa
Lsat_1_v5_gn_0_44400 2.0kb upstream 2.0kb upstream 3889   true Lsat_1_v8_lg_0: 11240420-11244308 Lactuca sativa
Lsat_1_v5_gn_0_44400 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 11240420-11242419 Lactuca sativa
Lsat_1_v5_gn_0_44400 2.0kb downstream 2.0kb downstream 3889   true Lsat_1_v8_lg_0: 11242420-11246308 Lactuca sativa
Lsat_1_v5_gn_0_44400 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 11244309-11246308 Lactuca sativa
Lsat_1_v5_gn_0_44400 5.0kb upstream 5.0kb upstream 6889   true Lsat_1_v8_lg_0: 11237420-11244308 Lactuca sativa
Lsat_1_v5_gn_0_44400 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 11237420-11242419 Lactuca sativa
Lsat_1_v5_gn_0_44400 5.0kb downstream 5.0kb downstream 6889   true Lsat_1_v8_lg_0: 11242420-11249308 Lactuca sativa
Lsat_1_v5_gn_0_44400 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 11244309-11249308 Lactuca sativa
Lsat_1_v5_gn_0_44400 10.0kb upstream 10.0kb upstream 11889   true Lsat_1_v8_lg_0: 11232420-11244308 Lactuca sativa
Lsat_1_v5_gn_0_44400 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 11232420-11242419 Lactuca sativa
Lsat_1_v5_gn_0_44400 10.0kb downstream 10.0kb downstream 11889   true Lsat_1_v8_lg_0: 11242420-11254308 Lactuca sativa
Lsat_1_v5_gn_0_44400 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 11244309-11254308 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479623 5263 Asterids View MSA
123742045 5271 Pentapetalae View MSA
122795182 5272 Eudicot View MSA
122050945 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350678 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain