Gene : Lsat_1_v5_gn_1_48300 L. sativa V8
Defline:  (1 of 2) PTHR14233//PTHR14233:SF13 - DUF914-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1650
Name:  ? Lsat_1_v5_gn_1_48300 Secondary Identifier:  ? PAC:38946900
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_48300 0.5kb upstream 0.5kb upstream 2745   true Lsat_1_v8_lg_1: 57358875-57361619 Lactuca sativa
Lsat_1_v5_gn_1_48300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 57361120-57361619 Lactuca sativa
Lsat_1_v5_gn_1_48300 0.5kb downstream 0.5kb downstream 2745   true Lsat_1_v8_lg_1: 57358375-57361119 Lactuca sativa
Lsat_1_v5_gn_1_48300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 57358375-57358874 Lactuca sativa
Lsat_1_v5_gn_1_48300 1.0kb upstream 1.0kb upstream 3245   true Lsat_1_v8_lg_1: 57358875-57362119 Lactuca sativa
Lsat_1_v5_gn_1_48300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 57361120-57362119 Lactuca sativa
Lsat_1_v5_gn_1_48300 1.0kb downstream 1.0kb downstream 3245   true Lsat_1_v8_lg_1: 57357875-57361119 Lactuca sativa
Lsat_1_v5_gn_1_48300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 57357875-57358874 Lactuca sativa
Lsat_1_v5_gn_1_48300 2.0kb upstream 2.0kb upstream 4245   true Lsat_1_v8_lg_1: 57358875-57363119 Lactuca sativa
Lsat_1_v5_gn_1_48300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 57361120-57363119 Lactuca sativa
Lsat_1_v5_gn_1_48300 2.0kb downstream 2.0kb downstream 4245   true Lsat_1_v8_lg_1: 57356875-57361119 Lactuca sativa
Lsat_1_v5_gn_1_48300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 57356875-57358874 Lactuca sativa
Lsat_1_v5_gn_1_48300 5.0kb upstream 5.0kb upstream 7245   true Lsat_1_v8_lg_1: 57358875-57366119 Lactuca sativa
Lsat_1_v5_gn_1_48300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 57361120-57366119 Lactuca sativa
Lsat_1_v5_gn_1_48300 5.0kb downstream 5.0kb downstream 7245   true Lsat_1_v8_lg_1: 57353875-57361119 Lactuca sativa
Lsat_1_v5_gn_1_48300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 57353875-57358874 Lactuca sativa
Lsat_1_v5_gn_1_48300 10.0kb upstream 10.0kb upstream 12245   true Lsat_1_v8_lg_1: 57358875-57371119 Lactuca sativa
Lsat_1_v5_gn_1_48300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 57361120-57371119 Lactuca sativa
Lsat_1_v5_gn_1_48300 10.0kb downstream 10.0kb downstream 12245   true Lsat_1_v8_lg_1: 57348875-57361119 Lactuca sativa
Lsat_1_v5_gn_1_48300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 57348875-57358874 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477098 5263 Asterids View MSA
123750685 5271 Pentapetalae View MSA
122794393 5272 Eudicot View MSA
122043877 5273 Angiosperm View MSA
121345871 5274 Embryophyte View MSA
123426042 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain