Gene : Lsat_1_v5_gn_1_70140 L. sativa V8
Defline:  (1 of 200) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2355
Name:  ? Lsat_1_v5_gn_1_70140 Secondary Identifier:  ? PAC:38945350
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_70140 0.5kb upstream 0.5kb upstream 2829   true Lsat_1_v8_lg_1: 84190642-84193470 Lactuca sativa
Lsat_1_v5_gn_1_70140 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 84190642-84191141 Lactuca sativa
Lsat_1_v5_gn_1_70140 0.5kb downstream 0.5kb downstream 2829   true Lsat_1_v8_lg_1: 84191142-84193970 Lactuca sativa
Lsat_1_v5_gn_1_70140 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 84193471-84193970 Lactuca sativa
Lsat_1_v5_gn_1_70140 1.0kb upstream 1.0kb upstream 3329   true Lsat_1_v8_lg_1: 84190142-84193470 Lactuca sativa
Lsat_1_v5_gn_1_70140 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 84190142-84191141 Lactuca sativa
Lsat_1_v5_gn_1_70140 1.0kb downstream 1.0kb downstream 3329   true Lsat_1_v8_lg_1: 84191142-84194470 Lactuca sativa
Lsat_1_v5_gn_1_70140 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 84193471-84194470 Lactuca sativa
Lsat_1_v5_gn_1_70140 2.0kb upstream 2.0kb upstream 4329   true Lsat_1_v8_lg_1: 84189142-84193470 Lactuca sativa
Lsat_1_v5_gn_1_70140 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 84189142-84191141 Lactuca sativa
Lsat_1_v5_gn_1_70140 2.0kb downstream 2.0kb downstream 4329   true Lsat_1_v8_lg_1: 84191142-84195470 Lactuca sativa
Lsat_1_v5_gn_1_70140 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 84193471-84195470 Lactuca sativa
Lsat_1_v5_gn_1_70140 5.0kb upstream 5.0kb upstream 7329   true Lsat_1_v8_lg_1: 84186142-84193470 Lactuca sativa
Lsat_1_v5_gn_1_70140 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 84186142-84191141 Lactuca sativa
Lsat_1_v5_gn_1_70140 5.0kb downstream 5.0kb downstream 7329   true Lsat_1_v8_lg_1: 84191142-84198470 Lactuca sativa
Lsat_1_v5_gn_1_70140 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 84193471-84198470 Lactuca sativa
Lsat_1_v5_gn_1_70140 10.0kb upstream 10.0kb upstream 12329   true Lsat_1_v8_lg_1: 84181142-84193470 Lactuca sativa
Lsat_1_v5_gn_1_70140 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 84181142-84191141 Lactuca sativa
Lsat_1_v5_gn_1_70140 10.0kb downstream 10.0kb downstream 12329   true Lsat_1_v8_lg_1: 84191142-84203470 Lactuca sativa
Lsat_1_v5_gn_1_70140 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 84193471-84203470 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466382 5263 Asterids View MSA
123736471 5271 Pentapetalae View MSA
122786011 5272 Eudicot View MSA
122048876 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain