Gene : Lsat_1_v5_gn_1_860 L. sativa V8
Defline:  (1 of 4) K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) Genomic Order:  32
Name:  ? Lsat_1_v5_gn_1_860 Secondary Identifier:  ? PAC:38944844
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_860 0.5kb upstream 0.5kb upstream 8925   true Lsat_1_v8_lg_1: 1601917-1610841 Lactuca sativa
Lsat_1_v5_gn_1_860 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 1601917-1602416 Lactuca sativa
Lsat_1_v5_gn_1_860 0.5kb downstream 0.5kb downstream 8925   true Lsat_1_v8_lg_1: 1602417-1611341 Lactuca sativa
Lsat_1_v5_gn_1_860 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 1610842-1611341 Lactuca sativa
Lsat_1_v5_gn_1_860 1.0kb upstream 1.0kb upstream 9425   true Lsat_1_v8_lg_1: 1601417-1610841 Lactuca sativa
Lsat_1_v5_gn_1_860 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 1601417-1602416 Lactuca sativa
Lsat_1_v5_gn_1_860 1.0kb downstream 1.0kb downstream 9425   true Lsat_1_v8_lg_1: 1602417-1611841 Lactuca sativa
Lsat_1_v5_gn_1_860 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 1610842-1611841 Lactuca sativa
Lsat_1_v5_gn_1_860 2.0kb upstream 2.0kb upstream 10425   true Lsat_1_v8_lg_1: 1600417-1610841 Lactuca sativa
Lsat_1_v5_gn_1_860 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 1600417-1602416 Lactuca sativa
Lsat_1_v5_gn_1_860 2.0kb downstream 2.0kb downstream 10425   true Lsat_1_v8_lg_1: 1602417-1612841 Lactuca sativa
Lsat_1_v5_gn_1_860 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 1610842-1612841 Lactuca sativa
Lsat_1_v5_gn_1_860 5.0kb upstream 5.0kb upstream 13425   true Lsat_1_v8_lg_1: 1597417-1610841 Lactuca sativa
Lsat_1_v5_gn_1_860 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 1597417-1602416 Lactuca sativa
Lsat_1_v5_gn_1_860 5.0kb downstream 5.0kb downstream 13425   true Lsat_1_v8_lg_1: 1602417-1615841 Lactuca sativa
Lsat_1_v5_gn_1_860 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 1610842-1615841 Lactuca sativa
Lsat_1_v5_gn_1_860 10.0kb upstream 10.0kb upstream 18425   true Lsat_1_v8_lg_1: 1592417-1610841 Lactuca sativa
Lsat_1_v5_gn_1_860 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 1592417-1602416 Lactuca sativa
Lsat_1_v5_gn_1_860 10.0kb downstream 10.0kb downstream 18425   true Lsat_1_v8_lg_1: 1602417-1620841 Lactuca sativa
Lsat_1_v5_gn_1_860 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 1610842-1620841 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041153 5273 Angiosperm View MSA
121475682 5263 Asterids View MSA
123741436 5271 Pentapetalae View MSA
122791943 5272 Eudicot View MSA
121347296 5274 Embryophyte View MSA
123380523 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain