Gene : Lsat_1_v5_gn_2_34800 L. sativa V8
Defline:  (1 of 2) K02705 - photosystem II CP43 chlorophyll apoprotein (psbC) Genomic Order:  925
Name:  ? Lsat_1_v5_gn_2_34800 Secondary Identifier:  ? PAC:38956711
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_34800 0.5kb upstream 0.5kb upstream 1922   true Lsat_1_v8_lg_2: 82765943-82767864 Lactuca sativa
Lsat_1_v5_gn_2_34800 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 82767365-82767864 Lactuca sativa
Lsat_1_v5_gn_2_34800 0.5kb downstream 0.5kb downstream 1922   true Lsat_1_v8_lg_2: 82765443-82767364 Lactuca sativa
Lsat_1_v5_gn_2_34800 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 82765443-82765942 Lactuca sativa
Lsat_1_v5_gn_2_34800 1.0kb upstream 1.0kb upstream 2422   true Lsat_1_v8_lg_2: 82765943-82768364 Lactuca sativa
Lsat_1_v5_gn_2_34800 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 82767365-82768364 Lactuca sativa
Lsat_1_v5_gn_2_34800 1.0kb downstream 1.0kb downstream 2422   true Lsat_1_v8_lg_2: 82764943-82767364 Lactuca sativa
Lsat_1_v5_gn_2_34800 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 82764943-82765942 Lactuca sativa
Lsat_1_v5_gn_2_34800 2.0kb upstream 2.0kb upstream 3422   true Lsat_1_v8_lg_2: 82765943-82769364 Lactuca sativa
Lsat_1_v5_gn_2_34800 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 82767365-82769364 Lactuca sativa
Lsat_1_v5_gn_2_34800 2.0kb downstream 2.0kb downstream 3422   true Lsat_1_v8_lg_2: 82763943-82767364 Lactuca sativa
Lsat_1_v5_gn_2_34800 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 82763943-82765942 Lactuca sativa
Lsat_1_v5_gn_2_34800 5.0kb upstream 5.0kb upstream 6422   true Lsat_1_v8_lg_2: 82765943-82772364 Lactuca sativa
Lsat_1_v5_gn_2_34800 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 82767365-82772364 Lactuca sativa
Lsat_1_v5_gn_2_34800 5.0kb downstream 5.0kb downstream 6422   true Lsat_1_v8_lg_2: 82760943-82767364 Lactuca sativa
Lsat_1_v5_gn_2_34800 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 82760943-82765942 Lactuca sativa
Lsat_1_v5_gn_2_34800 10.0kb upstream 10.0kb upstream 11422   true Lsat_1_v8_lg_2: 82765943-82777364 Lactuca sativa
Lsat_1_v5_gn_2_34800 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 82767365-82777364 Lactuca sativa
Lsat_1_v5_gn_2_34800 10.0kb downstream 10.0kb downstream 11422   true Lsat_1_v8_lg_2: 82755943-82767364 Lactuca sativa
Lsat_1_v5_gn_2_34800 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 82755943-82765942 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475463 5263 Asterids View MSA
123751197 5271 Pentapetalae View MSA
122773946 5272 Eudicot View MSA
122051576 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350250 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain