Gene : Lsat_1_v5_gn_0_9300 L. sativa V8
Defline:  (1 of 1) K12824 - transcription elongation regulator 1 (TCERG1, CA150) Genomic Order:  1073
Name:  ? Lsat_1_v5_gn_0_9300 Secondary Identifier:  ? PAC:38916802
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_9300 0.5kb upstream 0.5kb upstream 6611   true Lsat_1_v8_lg_3: 44398134-44404744 Lactuca sativa
Lsat_1_v5_gn_0_9300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 44398134-44398633 Lactuca sativa
Lsat_1_v5_gn_0_9300 0.5kb downstream 0.5kb downstream 6611   true Lsat_1_v8_lg_3: 44398634-44405244 Lactuca sativa
Lsat_1_v5_gn_0_9300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 44404745-44405244 Lactuca sativa
Lsat_1_v5_gn_0_9300 1.0kb upstream 1.0kb upstream 7111   true Lsat_1_v8_lg_3: 44397634-44404744 Lactuca sativa
Lsat_1_v5_gn_0_9300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 44397634-44398633 Lactuca sativa
Lsat_1_v5_gn_0_9300 1.0kb downstream 1.0kb downstream 7111   true Lsat_1_v8_lg_3: 44398634-44405744 Lactuca sativa
Lsat_1_v5_gn_0_9300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 44404745-44405744 Lactuca sativa
Lsat_1_v5_gn_0_9300 2.0kb upstream 2.0kb upstream 8111   true Lsat_1_v8_lg_3: 44396634-44404744 Lactuca sativa
Lsat_1_v5_gn_0_9300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 44396634-44398633 Lactuca sativa
Lsat_1_v5_gn_0_9300 2.0kb downstream 2.0kb downstream 8111   true Lsat_1_v8_lg_3: 44398634-44406744 Lactuca sativa
Lsat_1_v5_gn_0_9300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 44404745-44406744 Lactuca sativa
Lsat_1_v5_gn_0_9300 5.0kb upstream 5.0kb upstream 11111   true Lsat_1_v8_lg_3: 44393634-44404744 Lactuca sativa
Lsat_1_v5_gn_0_9300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 44393634-44398633 Lactuca sativa
Lsat_1_v5_gn_0_9300 5.0kb downstream 5.0kb downstream 11111   true Lsat_1_v8_lg_3: 44398634-44409744 Lactuca sativa
Lsat_1_v5_gn_0_9300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 44404745-44409744 Lactuca sativa
Lsat_1_v5_gn_0_9300 10.0kb upstream 10.0kb upstream 16111   true Lsat_1_v8_lg_3: 44388634-44404744 Lactuca sativa
Lsat_1_v5_gn_0_9300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 44388634-44398633 Lactuca sativa
Lsat_1_v5_gn_0_9300 10.0kb downstream 10.0kb downstream 16111   true Lsat_1_v8_lg_3: 44398634-44414744 Lactuca sativa
Lsat_1_v5_gn_0_9300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 44404745-44414744 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471661 5263 Asterids View MSA
123739157 5271 Pentapetalae View MSA
122793255 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain