Gene : Lsat_1_v5_gn_3_26741 L. sativa V8
Defline:  (1 of 1) PF00098//PF01336//PF04057//PF08646//PF16900 - Zinc knuckle (zf-CCHC) // OB-fold nucleic acid binding domain (tRNA_anti-codon) // Replication factor-A protein 1, N-terminal domain (Rep-A_N) // Replication factor-A C terminal domain (Rep_fac-A_C) // Replication protein A OB domain (REPA_OB_2) Genomic Order:  833
Name:  ? Lsat_1_v5_gn_3_26741 Secondary Identifier:  ? PAC:38921433
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_26741 0.5kb upstream 0.5kb upstream 4954   true Lsat_1_v8_lg_3: 36065624-36070577 Lactuca sativa
Lsat_1_v5_gn_3_26741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 36065624-36066123 Lactuca sativa
Lsat_1_v5_gn_3_26741 0.5kb downstream 0.5kb downstream 4954   true Lsat_1_v8_lg_3: 36066124-36071077 Lactuca sativa
Lsat_1_v5_gn_3_26741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 36070578-36071077 Lactuca sativa
Lsat_1_v5_gn_3_26741 1.0kb upstream 1.0kb upstream 5454   true Lsat_1_v8_lg_3: 36065124-36070577 Lactuca sativa
Lsat_1_v5_gn_3_26741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 36065124-36066123 Lactuca sativa
Lsat_1_v5_gn_3_26741 1.0kb downstream 1.0kb downstream 5454   true Lsat_1_v8_lg_3: 36066124-36071577 Lactuca sativa
Lsat_1_v5_gn_3_26741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 36070578-36071577 Lactuca sativa
Lsat_1_v5_gn_3_26741 2.0kb upstream 2.0kb upstream 6454   true Lsat_1_v8_lg_3: 36064124-36070577 Lactuca sativa
Lsat_1_v5_gn_3_26741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 36064124-36066123 Lactuca sativa
Lsat_1_v5_gn_3_26741 2.0kb downstream 2.0kb downstream 6454   true Lsat_1_v8_lg_3: 36066124-36072577 Lactuca sativa
Lsat_1_v5_gn_3_26741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 36070578-36072577 Lactuca sativa
Lsat_1_v5_gn_3_26741 5.0kb upstream 5.0kb upstream 9454   true Lsat_1_v8_lg_3: 36061124-36070577 Lactuca sativa
Lsat_1_v5_gn_3_26741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 36061124-36066123 Lactuca sativa
Lsat_1_v5_gn_3_26741 5.0kb downstream 5.0kb downstream 9454   true Lsat_1_v8_lg_3: 36066124-36075577 Lactuca sativa
Lsat_1_v5_gn_3_26741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 36070578-36075577 Lactuca sativa
Lsat_1_v5_gn_3_26741 10.0kb upstream 10.0kb upstream 14454   true Lsat_1_v8_lg_3: 36056124-36070577 Lactuca sativa
Lsat_1_v5_gn_3_26741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 36056124-36066123 Lactuca sativa
Lsat_1_v5_gn_3_26741 10.0kb downstream 10.0kb downstream 14454   true Lsat_1_v8_lg_3: 36066124-36080577 Lactuca sativa
Lsat_1_v5_gn_3_26741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 36070578-36080577 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473510 5263 Asterids View MSA
123745243 5271 Pentapetalae View MSA
122789986 5272 Eudicot View MSA
122046112 5273 Angiosperm View MSA
121350222 5274 Embryophyte View MSA
123423860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain