Gene : Lsat_1_v5_gn_4_49520 L. sativa V8
Defline:  (1 of 1) PTHR11618//PTHR11618:SF23 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1473
Name:  ? Lsat_1_v5_gn_4_49520 Secondary Identifier:  ? PAC:38931431
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_49520 0.5kb upstream 0.5kb upstream 2333   true Lsat_1_v8_lg_4: 73235099-73237431 Lactuca sativa
Lsat_1_v5_gn_4_49520 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 73236932-73237431 Lactuca sativa
Lsat_1_v5_gn_4_49520 0.5kb downstream 0.5kb downstream 2333   true Lsat_1_v8_lg_4: 73234599-73236931 Lactuca sativa
Lsat_1_v5_gn_4_49520 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 73234599-73235098 Lactuca sativa
Lsat_1_v5_gn_4_49520 1.0kb upstream 1.0kb upstream 2833   true Lsat_1_v8_lg_4: 73235099-73237931 Lactuca sativa
Lsat_1_v5_gn_4_49520 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 73236932-73237931 Lactuca sativa
Lsat_1_v5_gn_4_49520 1.0kb downstream 1.0kb downstream 2833   true Lsat_1_v8_lg_4: 73234099-73236931 Lactuca sativa
Lsat_1_v5_gn_4_49520 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 73234099-73235098 Lactuca sativa
Lsat_1_v5_gn_4_49520 2.0kb upstream 2.0kb upstream 3833   true Lsat_1_v8_lg_4: 73235099-73238931 Lactuca sativa
Lsat_1_v5_gn_4_49520 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 73236932-73238931 Lactuca sativa
Lsat_1_v5_gn_4_49520 2.0kb downstream 2.0kb downstream 3833   true Lsat_1_v8_lg_4: 73233099-73236931 Lactuca sativa
Lsat_1_v5_gn_4_49520 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 73233099-73235098 Lactuca sativa
Lsat_1_v5_gn_4_49520 5.0kb upstream 5.0kb upstream 6833   true Lsat_1_v8_lg_4: 73235099-73241931 Lactuca sativa
Lsat_1_v5_gn_4_49520 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 73236932-73241931 Lactuca sativa
Lsat_1_v5_gn_4_49520 5.0kb downstream 5.0kb downstream 6833   true Lsat_1_v8_lg_4: 73230099-73236931 Lactuca sativa
Lsat_1_v5_gn_4_49520 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 73230099-73235098 Lactuca sativa
Lsat_1_v5_gn_4_49520 10.0kb upstream 10.0kb upstream 11833   true Lsat_1_v8_lg_4: 73235099-73246931 Lactuca sativa
Lsat_1_v5_gn_4_49520 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 73236932-73246931 Lactuca sativa
Lsat_1_v5_gn_4_49520 10.0kb downstream 10.0kb downstream 11833   true Lsat_1_v8_lg_4: 73225099-73236931 Lactuca sativa
Lsat_1_v5_gn_4_49520 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 73225099-73235098 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468321 5263 Asterids View MSA
123742191 5271 Pentapetalae View MSA
122787938 5272 Eudicot View MSA
122042980 5273 Angiosperm View MSA
121346449 5274 Embryophyte View MSA
123427604 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain