Gene : Lsat_1_v5_gn_5_119861 L. sativa V8
Defline:  (1 of 1) KOG0131//KOG0148 - Splicing factor 3b, subunit 4 // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) Genomic Order:  3193
Name:  ? Lsat_1_v5_gn_5_119861 Secondary Identifier:  ? PAC:38966276
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_119861 0.5kb upstream 0.5kb upstream 4316   true Lsat_1_v8_lg_5: 243959741-243964056 Lactuca sativa
Lsat_1_v5_gn_5_119861 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 243963557-243964056 Lactuca sativa
Lsat_1_v5_gn_5_119861 0.5kb downstream 0.5kb downstream 4316   true Lsat_1_v8_lg_5: 243959241-243963556 Lactuca sativa
Lsat_1_v5_gn_5_119861 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 243959241-243959740 Lactuca sativa
Lsat_1_v5_gn_5_119861 1.0kb upstream 1.0kb upstream 4816   true Lsat_1_v8_lg_5: 243959741-243964556 Lactuca sativa
Lsat_1_v5_gn_5_119861 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 243963557-243964556 Lactuca sativa
Lsat_1_v5_gn_5_119861 1.0kb downstream 1.0kb downstream 4816   true Lsat_1_v8_lg_5: 243958741-243963556 Lactuca sativa
Lsat_1_v5_gn_5_119861 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 243958741-243959740 Lactuca sativa
Lsat_1_v5_gn_5_119861 2.0kb upstream 2.0kb upstream 5816   true Lsat_1_v8_lg_5: 243959741-243965556 Lactuca sativa
Lsat_1_v5_gn_5_119861 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 243963557-243965556 Lactuca sativa
Lsat_1_v5_gn_5_119861 2.0kb downstream 2.0kb downstream 5816   true Lsat_1_v8_lg_5: 243957741-243963556 Lactuca sativa
Lsat_1_v5_gn_5_119861 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 243957741-243959740 Lactuca sativa
Lsat_1_v5_gn_5_119861 5.0kb upstream 5.0kb upstream 8816   true Lsat_1_v8_lg_5: 243959741-243968556 Lactuca sativa
Lsat_1_v5_gn_5_119861 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 243963557-243968556 Lactuca sativa
Lsat_1_v5_gn_5_119861 5.0kb downstream 5.0kb downstream 8816   true Lsat_1_v8_lg_5: 243954741-243963556 Lactuca sativa
Lsat_1_v5_gn_5_119861 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 243954741-243959740 Lactuca sativa
Lsat_1_v5_gn_5_119861 10.0kb upstream 10.0kb upstream 13816   true Lsat_1_v8_lg_5: 243959741-243973556 Lactuca sativa
Lsat_1_v5_gn_5_119861 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 243963557-243973556 Lactuca sativa
Lsat_1_v5_gn_5_119861 10.0kb downstream 10.0kb downstream 13816   true Lsat_1_v8_lg_5: 243949741-243963556 Lactuca sativa
Lsat_1_v5_gn_5_119861 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 243949741-243959740 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480633 5263 Asterids View MSA
123740266 5271 Pentapetalae View MSA
122794524 5272 Eudicot View MSA
122049515 5273 Angiosperm View MSA
121344395 5274 Embryophyte View MSA
123428747 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain