Gene : Lsat_1_v5_gn_5_47401 L. sativa V8
Defline:  (1 of 4) K17686 - Cu+-exporting ATPase (copA, ATP7) Genomic Order:  1253
Name:  ? Lsat_1_v5_gn_5_47401 Secondary Identifier:  ? PAC:38970345
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_47401 0.5kb upstream 0.5kb upstream 5514   true Lsat_1_v8_lg_5: 108141710-108147223 Lactuca sativa
Lsat_1_v5_gn_5_47401 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 108141710-108142209 Lactuca sativa
Lsat_1_v5_gn_5_47401 0.5kb downstream 0.5kb downstream 5514   true Lsat_1_v8_lg_5: 108142210-108147723 Lactuca sativa
Lsat_1_v5_gn_5_47401 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 108147224-108147723 Lactuca sativa
Lsat_1_v5_gn_5_47401 1.0kb upstream 1.0kb upstream 6014   true Lsat_1_v8_lg_5: 108141210-108147223 Lactuca sativa
Lsat_1_v5_gn_5_47401 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 108141210-108142209 Lactuca sativa
Lsat_1_v5_gn_5_47401 1.0kb downstream 1.0kb downstream 6014   true Lsat_1_v8_lg_5: 108142210-108148223 Lactuca sativa
Lsat_1_v5_gn_5_47401 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 108147224-108148223 Lactuca sativa
Lsat_1_v5_gn_5_47401 2.0kb upstream 2.0kb upstream 7014   true Lsat_1_v8_lg_5: 108140210-108147223 Lactuca sativa
Lsat_1_v5_gn_5_47401 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 108140210-108142209 Lactuca sativa
Lsat_1_v5_gn_5_47401 2.0kb downstream 2.0kb downstream 7014   true Lsat_1_v8_lg_5: 108142210-108149223 Lactuca sativa
Lsat_1_v5_gn_5_47401 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 108147224-108149223 Lactuca sativa
Lsat_1_v5_gn_5_47401 5.0kb upstream 5.0kb upstream 10014   true Lsat_1_v8_lg_5: 108137210-108147223 Lactuca sativa
Lsat_1_v5_gn_5_47401 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 108137210-108142209 Lactuca sativa
Lsat_1_v5_gn_5_47401 5.0kb downstream 5.0kb downstream 10014   true Lsat_1_v8_lg_5: 108142210-108152223 Lactuca sativa
Lsat_1_v5_gn_5_47401 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 108147224-108152223 Lactuca sativa
Lsat_1_v5_gn_5_47401 10.0kb upstream 10.0kb upstream 15014   true Lsat_1_v8_lg_5: 108132210-108147223 Lactuca sativa
Lsat_1_v5_gn_5_47401 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 108132210-108142209 Lactuca sativa
Lsat_1_v5_gn_5_47401 10.0kb downstream 10.0kb downstream 15014   true Lsat_1_v8_lg_5: 108142210-108157223 Lactuca sativa
Lsat_1_v5_gn_5_47401 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 108147224-108157223 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468025 5263 Asterids View MSA
123737302 5271 Pentapetalae View MSA
122788336 5272 Eudicot View MSA
122045942 5273 Angiosperm View MSA
121346195 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain