Gene : Lsat_1_v5_gn_5_190620 L. sativa V8
Defline:  (1 of 1) K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) Genomic Order:  5301
Name:  ? Lsat_1_v5_gn_5_190620 Secondary Identifier:  ? PAC:38970220
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_190620 0.5kb upstream 0.5kb upstream 2289   true Lsat_1_v8_lg_5: 339501763-339504051 Lactuca sativa
Lsat_1_v5_gn_5_190620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 339503552-339504051 Lactuca sativa
Lsat_1_v5_gn_5_190620 0.5kb downstream 0.5kb downstream 2289   true Lsat_1_v8_lg_5: 339501263-339503551 Lactuca sativa
Lsat_1_v5_gn_5_190620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 339501263-339501762 Lactuca sativa
Lsat_1_v5_gn_5_190620 1.0kb upstream 1.0kb upstream 2789   true Lsat_1_v8_lg_5: 339501763-339504551 Lactuca sativa
Lsat_1_v5_gn_5_190620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 339503552-339504551 Lactuca sativa
Lsat_1_v5_gn_5_190620 1.0kb downstream 1.0kb downstream 2789   true Lsat_1_v8_lg_5: 339500763-339503551 Lactuca sativa
Lsat_1_v5_gn_5_190620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 339500763-339501762 Lactuca sativa
Lsat_1_v5_gn_5_190620 2.0kb upstream 2.0kb upstream 3789   true Lsat_1_v8_lg_5: 339501763-339505551 Lactuca sativa
Lsat_1_v5_gn_5_190620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 339503552-339505551 Lactuca sativa
Lsat_1_v5_gn_5_190620 2.0kb downstream 2.0kb downstream 3789   true Lsat_1_v8_lg_5: 339499763-339503551 Lactuca sativa
Lsat_1_v5_gn_5_190620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 339499763-339501762 Lactuca sativa
Lsat_1_v5_gn_5_190620 5.0kb upstream 5.0kb upstream 6789   true Lsat_1_v8_lg_5: 339501763-339508551 Lactuca sativa
Lsat_1_v5_gn_5_190620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 339503552-339508551 Lactuca sativa
Lsat_1_v5_gn_5_190620 5.0kb downstream 5.0kb downstream 6789   true Lsat_1_v8_lg_5: 339496763-339503551 Lactuca sativa
Lsat_1_v5_gn_5_190620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 339496763-339501762 Lactuca sativa
Lsat_1_v5_gn_5_190620 10.0kb upstream 10.0kb upstream 11789   true Lsat_1_v8_lg_5: 339501763-339513551 Lactuca sativa
Lsat_1_v5_gn_5_190620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 339503552-339513551 Lactuca sativa
Lsat_1_v5_gn_5_190620 10.0kb downstream 10.0kb downstream 11789   true Lsat_1_v8_lg_5: 339491763-339503551 Lactuca sativa
Lsat_1_v5_gn_5_190620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 339491763-339501762 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481201 5263 Asterids View MSA
123737772 5271 Pentapetalae View MSA
122793986 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain