Gene : Lsat_1_v5_gn_5_33160 L. sativa V8
Defline:  (1 of 1) K11090 - lupus La protein (LA, SSB) Genomic Order:  937
Name:  ? Lsat_1_v5_gn_5_33160 Secondary Identifier:  ? PAC:38966261
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_33160 0.5kb upstream 0.5kb upstream 3476   true Lsat_1_v8_lg_5: 71362013-71365488 Lactuca sativa
Lsat_1_v5_gn_5_33160 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 71364989-71365488 Lactuca sativa
Lsat_1_v5_gn_5_33160 0.5kb downstream 0.5kb downstream 3476   true Lsat_1_v8_lg_5: 71361513-71364988 Lactuca sativa
Lsat_1_v5_gn_5_33160 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 71361513-71362012 Lactuca sativa
Lsat_1_v5_gn_5_33160 1.0kb upstream 1.0kb upstream 3976   true Lsat_1_v8_lg_5: 71362013-71365988 Lactuca sativa
Lsat_1_v5_gn_5_33160 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 71364989-71365988 Lactuca sativa
Lsat_1_v5_gn_5_33160 1.0kb downstream 1.0kb downstream 3976   true Lsat_1_v8_lg_5: 71361013-71364988 Lactuca sativa
Lsat_1_v5_gn_5_33160 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 71361013-71362012 Lactuca sativa
Lsat_1_v5_gn_5_33160 2.0kb upstream 2.0kb upstream 4976   true Lsat_1_v8_lg_5: 71362013-71366988 Lactuca sativa
Lsat_1_v5_gn_5_33160 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 71364989-71366988 Lactuca sativa
Lsat_1_v5_gn_5_33160 2.0kb downstream 2.0kb downstream 4976   true Lsat_1_v8_lg_5: 71360013-71364988 Lactuca sativa
Lsat_1_v5_gn_5_33160 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 71360013-71362012 Lactuca sativa
Lsat_1_v5_gn_5_33160 5.0kb upstream 5.0kb upstream 7976   true Lsat_1_v8_lg_5: 71362013-71369988 Lactuca sativa
Lsat_1_v5_gn_5_33160 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 71364989-71369988 Lactuca sativa
Lsat_1_v5_gn_5_33160 5.0kb downstream 5.0kb downstream 7976   true Lsat_1_v8_lg_5: 71357013-71364988 Lactuca sativa
Lsat_1_v5_gn_5_33160 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 71357013-71362012 Lactuca sativa
Lsat_1_v5_gn_5_33160 10.0kb upstream 10.0kb upstream 12976   true Lsat_1_v8_lg_5: 71362013-71374988 Lactuca sativa
Lsat_1_v5_gn_5_33160 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 71364989-71374988 Lactuca sativa
Lsat_1_v5_gn_5_33160 10.0kb downstream 10.0kb downstream 12976   true Lsat_1_v8_lg_5: 71352013-71364988 Lactuca sativa
Lsat_1_v5_gn_5_33160 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 71352013-71362012 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041135 5273 Angiosperm View MSA
121471163 5263 Asterids View MSA
123746572 5271 Pentapetalae View MSA
122791313 5272 Eudicot View MSA
121349930 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain