Gene : Lsat_1_v5_gn_8_11900 L. sativa V8
Defline:  (1 of 4) K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Genomic Order:  459
Name:  ? Lsat_1_v5_gn_8_11900 Secondary Identifier:  ? PAC:38954000
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_11900 0.5kb upstream 0.5kb upstream 2573   true Lsat_1_v8_lg_8: 17094747-17097319 Lactuca sativa
Lsat_1_v5_gn_8_11900 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 17094747-17095246 Lactuca sativa
Lsat_1_v5_gn_8_11900 0.5kb downstream 0.5kb downstream 2573   true Lsat_1_v8_lg_8: 17095247-17097819 Lactuca sativa
Lsat_1_v5_gn_8_11900 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 17097320-17097819 Lactuca sativa
Lsat_1_v5_gn_8_11900 1.0kb upstream 1.0kb upstream 3073   true Lsat_1_v8_lg_8: 17094247-17097319 Lactuca sativa
Lsat_1_v5_gn_8_11900 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 17094247-17095246 Lactuca sativa
Lsat_1_v5_gn_8_11900 1.0kb downstream 1.0kb downstream 3073   true Lsat_1_v8_lg_8: 17095247-17098319 Lactuca sativa
Lsat_1_v5_gn_8_11900 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 17097320-17098319 Lactuca sativa
Lsat_1_v5_gn_8_11900 2.0kb upstream 2.0kb upstream 4073   true Lsat_1_v8_lg_8: 17093247-17097319 Lactuca sativa
Lsat_1_v5_gn_8_11900 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 17093247-17095246 Lactuca sativa
Lsat_1_v5_gn_8_11900 2.0kb downstream 2.0kb downstream 4073   true Lsat_1_v8_lg_8: 17095247-17099319 Lactuca sativa
Lsat_1_v5_gn_8_11900 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 17097320-17099319 Lactuca sativa
Lsat_1_v5_gn_8_11900 5.0kb upstream 5.0kb upstream 7073   true Lsat_1_v8_lg_8: 17090247-17097319 Lactuca sativa
Lsat_1_v5_gn_8_11900 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 17090247-17095246 Lactuca sativa
Lsat_1_v5_gn_8_11900 5.0kb downstream 5.0kb downstream 7073   true Lsat_1_v8_lg_8: 17095247-17102319 Lactuca sativa
Lsat_1_v5_gn_8_11900 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 17097320-17102319 Lactuca sativa
Lsat_1_v5_gn_8_11900 10.0kb upstream 10.0kb upstream 12073   true Lsat_1_v8_lg_8: 17085247-17097319 Lactuca sativa
Lsat_1_v5_gn_8_11900 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 17085247-17095246 Lactuca sativa
Lsat_1_v5_gn_8_11900 10.0kb downstream 10.0kb downstream 12073   true Lsat_1_v8_lg_8: 17095247-17107319 Lactuca sativa
Lsat_1_v5_gn_8_11900 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 17097320-17107319 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467771 5263 Asterids View MSA
123737180 5271 Pentapetalae View MSA
122791950 5272 Eudicot View MSA
122050524 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121311967 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain