Protein : Lsat_1_v5_gn_8_121800.3 L. sativa V8
Secondary Identifier:  PAC:38953305 Organism Name:  Lactuca sativa
Length:  988   Name:  Lsat_1_v5_gn_8_121800.3
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SummaryProteinsOther
 
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SummaryProteinsOther
 

Ontology Annotation Displayer

Protein Family Displayer

Protein Feature Displayer

Proteins

8 Protein Domains

DB identifier Type Name
IPR002318 Family Alanine-tRNA ligase, class IIc
IPR018162 Domain Alanine-tRNA ligase, class IIc, anti-codon-binding domain
IPR002942 Domain RNA-binding S4 domain
IPR009000 Domain Translation protein, beta-barrel domain
IPR012947 Domain Threonyl/alanyl tRNA synthetase, SAD
IPR018163 Domain Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain
IPR018165 Domain Alanyl-tRNA synthetase, class IIc, core domain
IPR018164 Domain Alanyl-tRNA synthetase, class IIc, N-terminal
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Lsat_1_v5_gn_8_121800.3_CDS 2964   Lsat_1_v8_lg_8: 187745736-187751694 Lactuca sativa

35 Ontology Annotations

Ontology Term Db Gene/Protein Name
GO:0003676 GO Lsat_1_v5_gn_8_121800.3
GO:0003723 GO Lsat_1_v5_gn_8_121800.3
G3DSA:3.30.930.10 GENE3D Lsat_1_v5_gn_8_121800.3
GO:0000166 GO Lsat_1_v5_gn_8_121800.3
GO:0005737 GO Lsat_1_v5_gn_8_121800.3
GO:0006419 GO Lsat_1_v5_gn_8_121800.3
GO:0004813 GO Lsat_1_v5_gn_8_121800.3
GO:0005524 GO Lsat_1_v5_gn_8_121800.3
IPR002318 InterPro Lsat_1_v5_gn_8_121800.3
IPR002942 InterPro Lsat_1_v5_gn_8_121800.3
GO:0016876 GO Lsat_1_v5_gn_8_121800.3
GO:0043039 GO Lsat_1_v5_gn_8_121800.3
IPR018162 InterPro Lsat_1_v5_gn_8_121800.3
IPR018163 InterPro Lsat_1_v5_gn_8_121800.3
IPR009000 InterPro Lsat_1_v5_gn_8_121800.3
IPR012947 InterPro Lsat_1_v5_gn_8_121800.3
6.1.1.7 ENZYME Lsat_1_v5_gn_8_121800.3
G3DSA:3.10.290.10 GENE3D Lsat_1_v5_gn_8_121800.3
TIGR00344 TIGRFAMs Lsat_1_v5_gn_8_121800.3
K01872 KEGG Lsat_1_v5_gn_8_121800.3
ALANINE--TRNA-LIGASE-RXN MetaCyc Lsat_1_v5_gn_8_121800.3
IPR018164 InterPro Lsat_1_v5_gn_8_121800.3
IPR018165 InterPro Lsat_1_v5_gn_8_121800.3
TRNA-CHARGING-PWY Pathway Lsat_1_v5_gn_8_121800.3
PF01411 PFAM Lsat_1_v5_gn_8_121800.3
PTHR11777 PANTHER Lsat_1_v5_gn_8_121800.3
PTHR11777:SF14 PANTHER Lsat_1_v5_gn_8_121800.3
PS50860 PROFILE Lsat_1_v5_gn_8_121800.3
SM00863 SMART Lsat_1_v5_gn_8_121800.3
PF07973 PFAM Lsat_1_v5_gn_8_121800.3

1 Pathway Components

Type Key Level Step
      84

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa TRNA-CHARGING-PWY Lactuca sativa pathologic