Gene : Lsat_1_v5_gn_8_77780 L. sativa V8
Defline:  (1 of 3) K13195 - cold-inducible RNA-binding protein (CIRBP) Genomic Order:  2362
Name:  ? Lsat_1_v5_gn_8_77780 Secondary Identifier:  ? PAC:38954754
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_77780 0.5kb upstream 0.5kb upstream 11086   true Lsat_1_v8_lg_8: 111441056-111452141 Lactuca sativa
Lsat_1_v5_gn_8_77780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 111451642-111452141 Lactuca sativa
Lsat_1_v5_gn_8_77780 0.5kb downstream 0.5kb downstream 11086   true Lsat_1_v8_lg_8: 111440556-111451641 Lactuca sativa
Lsat_1_v5_gn_8_77780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 111440556-111441055 Lactuca sativa
Lsat_1_v5_gn_8_77780 1.0kb upstream 1.0kb upstream 11586   true Lsat_1_v8_lg_8: 111441056-111452641 Lactuca sativa
Lsat_1_v5_gn_8_77780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 111451642-111452641 Lactuca sativa
Lsat_1_v5_gn_8_77780 1.0kb downstream 1.0kb downstream 11586   true Lsat_1_v8_lg_8: 111440056-111451641 Lactuca sativa
Lsat_1_v5_gn_8_77780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 111440056-111441055 Lactuca sativa
Lsat_1_v5_gn_8_77780 2.0kb upstream 2.0kb upstream 12586   true Lsat_1_v8_lg_8: 111441056-111453641 Lactuca sativa
Lsat_1_v5_gn_8_77780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 111451642-111453641 Lactuca sativa
Lsat_1_v5_gn_8_77780 2.0kb downstream 2.0kb downstream 12586   true Lsat_1_v8_lg_8: 111439056-111451641 Lactuca sativa
Lsat_1_v5_gn_8_77780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 111439056-111441055 Lactuca sativa
Lsat_1_v5_gn_8_77780 5.0kb upstream 5.0kb upstream 15586   true Lsat_1_v8_lg_8: 111441056-111456641 Lactuca sativa
Lsat_1_v5_gn_8_77780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 111451642-111456641 Lactuca sativa
Lsat_1_v5_gn_8_77780 5.0kb downstream 5.0kb downstream 15586   true Lsat_1_v8_lg_8: 111436056-111451641 Lactuca sativa
Lsat_1_v5_gn_8_77780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 111436056-111441055 Lactuca sativa
Lsat_1_v5_gn_8_77780 10.0kb upstream 10.0kb upstream 20586   true Lsat_1_v8_lg_8: 111441056-111461641 Lactuca sativa
Lsat_1_v5_gn_8_77780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 111451642-111461641 Lactuca sativa
Lsat_1_v5_gn_8_77780 10.0kb downstream 10.0kb downstream 20586   true Lsat_1_v8_lg_8: 111431056-111451641 Lactuca sativa
Lsat_1_v5_gn_8_77780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 111431056-111441055 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121452698 5263 Asterids View MSA
123747843 5271 Pentapetalae View MSA
122790614 5272 Eudicot View MSA
122044868 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain