Protein Family : PF00665//PF07727 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) 123982866

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  3

3 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Cucsa.007280 (1 of 21) PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON C. sativus v1.0 5605   scaffold00089: 150841-156445
Cucsa.235610 (1 of 5) PF00665//PF07727 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) C. sativus v1.0 4900   scaffold02012: 150014-154913
Cucsa.261680 (1 of 1) PF00665//PF07727//PF13976//PF14223 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) C. sativus v1.0 4598   scaffold02265: 109052-113649

3 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.235610.1 C. sativus v1.0 123982866 PF00665//PF07727 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) 3 5270 Rosid
Cucsa.261680.1 C. sativus v1.0 123982866 PF00665//PF07727 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) 3 5270 Rosid
Cucsa.007280.1 C. sativus v1.0 123982866 PF00665//PF07727 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) 3 5270 Rosid