Protein Family : transposon protein, putative, CACTA, En/Spm sub-class, expressed 124574359

Method ID:  5269 Method Name:  Grass
Sequence Alignment:  View MSA Member Count:  18

18 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Traes_4AL_98AA61AC9 (1 of 9) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN T. aestivum v2.2 5627   ta_iwgsc_4al_v2_7073388: 1377-7003
Traes_4DS_FABA6C874 (1 of 9) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN T. aestivum v2.2 5512   ta_iwgsc_4ds_v1_2277038: 2620-8131
Seita.8G236800 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN S. italica v2.2 5027   scaffold_8: 38988577-38993603
Bradi4g09940 (1 of 5) K12837 - splicing factor U2AF 65 kDa subunit (U2AF2) B. distachyon v3.1 5416   Bd4: 9453370-9458785
LOC_Os11g45590 (1 of 1) KOG0120//KOG0124//KOG0131 - Splicing factor U2AF, large subunit (RRM superfamily) // Polypyrimidine tract-binding protein PUF60 (RRM superfamily) // Splicing factor 3b, subunit 4 O. sativa v7.0 5251   Chr11: 27590978-27596228
Zm00008a014896 (1 of 1) PF00076//PF13893//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_5) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) Z. mays PH207 v1.1 5934   chr04: 2109828-2115761
Pavir.8KG387700 (1 of 6) K12837 - splicing factor U2AF 65 kDa subunit (U2AF2) P. virgatum v4.1 5735   Chr08K: 76031181-76036915
Pavir.8NG311800 (1 of 6) K12837 - splicing factor U2AF 65 kDa subunit (U2AF2) P. virgatum v4.1 5280   Chr08N: 69464230-69469509
Sobic.005G216300 (1 of 3) K12837 - splicing factor U2AF 65 kDa subunit (U2AF2) S. bicolor v3.1.1 5479   Chr05: 70199580-70205058
HORVU4Hr1G029030 (1 of 2) K12837 - splicing factor U2AF 65 kDa subunit (U2AF2) H. vulgare r1 6377   chr4H: 182786276-182792652
Zm00001d048655 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED Z. mays RefGen_V4 5922   4: 2668192-2674113
Pahal.8G260800 (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED P. hallii v3.1 5225   Chr08: 44226063-44231287
PhHAL.8G255900 (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED P. hallii HAL v2.1 5205   Chr08: 41274331-41279535
MisinT229900 (1 of 6) K12837 - splicing factor U2AF 65 kDa subunit (U2AF2) M. sinensis v7.1 5318   scaffold00452: 24572-29889
Misin09G178400 (1 of 6) K12837 - splicing factor U2AF 65 kDa subunit (U2AF2) M. sinensis v7.1 5959   Chr09: 72039038-72044996
OsKitaake11g233700 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED O. sativa Kitaake v3.1 5259   Chr11: 28525721-28530979
Sevir.8G247400 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED S. viridis v2.1 4793   Chr_08: 39198933-39203725
Brast10G187500 (1 of 4) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN B. stacei v1.1 5086   Chr10: 17942140-17947225

18 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Traes_4AL_98AA61AC9.2 T. aestivum v2.2 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 2 5269 Grass
Traes_4DS_FABA6C874.2 T. aestivum v2.2 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 2 5269 Grass
Seita.8G236800.1.p S. italica v2.2 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 1 5269 Grass
Bradi4g09940.2.p B. distachyon v3.1 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 1 5269 Grass
Brast10G187500.1.p B. stacei v1.1 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 1 5269 Grass
LOC_Os11g45590.1 O. sativa v7.0 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 1 5269 Grass
Zm00008a014896_P01 Z. mays PH207 v1.1 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 1 5269 Grass
Pavir.8KG387700.1.p P. virgatum v4.1 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 2 5269 Grass
Pavir.8NG311800.1.p P. virgatum v4.1 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 2 5269 Grass
Sobic.005G216300.1.p S. bicolor v3.1.1 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 1 5269 Grass
HORVU4Hr1G029030.22 H. vulgare r1 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 1 5269 Grass
Zm00001d048655_P012 Z. mays RefGen_V4 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 1 5269 Grass
Pahal.8G260800.1.p P. hallii v3.1 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 1 5269 Grass
PhHAL.8G255900.1.p P. hallii HAL v2.1 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 1 5269 Grass
MisinT229900.1.p M. sinensis v7.1 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 2 5269 Grass
Misin09G178400.1.p M. sinensis v7.1 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 2 5269 Grass
OsKitaake11g233700.1.p O. sativa Kitaake v3.1 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 1 5269 Grass
Sevir.8G247400.1.p S. viridis v2.1 124574359 transposon protein, putative, CACTA, En/Spm sub-class, expressed 1 5269 Grass