Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 124244396

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  17

17 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30076.t000011 (1 of 1) KOG0106//KOG0114//KOG0131//KOG0146 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) R. communis v0.1 1179   30076: 60680-61858
orange1.1g022096m.g (1 of 1) KOG0131//KOG0146//KOG4206 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B C. sinensis v1.1 1953   scaffold00001: 3383418-3385370
AT1G01080 (1 of 1) KOG0131//KOG0146 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) A. thaliana TAIR10 1724   Chr1: 45296-47019
Thhalv10008355m.g (1 of 1) KOG0146 - RNA-binding protein ETR-3 (RRM superfamily) E. salsugineum v1.0 1607   scaffold_5: 15224064-15225670
Ciclev10021531m.g (1 of 1) KOG0146 - RNA-binding protein ETR-3 (RRM superfamily) C. clementina v1.0 1914   scaffold_3: 47576123-47578036
Lus10002676.g (1 of 1) KOG0123//KOG0131 - Polyadenylate-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 L. usitatissimum v1.0 1199   scaffold1347: 40934-42132
Lus10030194.g (1 of 37) KOG0131 - Splicing factor 3b, subunit 4 L. usitatissimum v1.0 1198   scaffold217: 171635-172832
Araha.2490s0025 (1 of 25) KOG0131 - Splicing factor 3b, subunit 4 A. halleri v1.1 1607   Scaffold2490: 116467-118073
Cagra.1968s0053 (1 of 25) KOG0131 - Splicing factor 3b, subunit 4 C. grandiflora v1.1 1347   Scaffold1968: 175951-177297
Brara.J00072 (1 of 44) KOG0131 - Splicing factor 3b, subunit 4 B. rapa FPsc v1.3 1315   A10: 366532-367846
Bostr.5325s0030 (1 of 26) KOG0131 - Splicing factor 3b, subunit 4 B. stricta v1.2 1489   Scaffold5325: 203450-204938
SapurV1A.0162s0290 (1 of 1) KOG0131//KOG0146//KOG4206//KOG4210 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B // Nuclear localization sequence binding protein S. purpurea v1.0 2112   chr14: 7961360-7963471
Manes.01G239700 (1 of 1) KOG0114//KOG0131//KOG0144//KOG0146 - Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ETR-3 (RRM superfamily) M. esculenta v6.1 1630   Chromosome01: 31962492-31964121
AL1G11440 (1 of 1) KOG0131//KOG0146 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) A. lyrata v2.1 1688   scaffold_1: 494560-496247
Potri.014G105800 (1 of 1) KOG0146 - RNA-binding protein ETR-3 (RRM superfamily) P. trichocarpa v3.1 2032   Chr14: 8336309-8338340
Podel.14G109100 (1 of 1) KOG0131//KOG0146//KOG4206 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B P. deltoides WV94 v2.1 2059   Chr14: 7988096-7990154
Carub.0001s0114 (1 of 29) KOG0131 - Splicing factor 3b, subunit 4 C. rubella v1.1 1443   scaffold_1: 398479-399921

17 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g022096m C. sinensis v1.1 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Thhalv10008355m E. salsugineum v1.0 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Lus10002676 L. usitatissimum v1.0 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
SapurV1A.0162s0290.1.p S. purpurea v1.0 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Potri.014G105800.1.p P. trichocarpa v3.1 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
30076.m004447 R. communis v0.1 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
AT1G01080.2 A. thaliana TAIR10 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Ciclev10021531m C. clementina v1.0 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Lus10030194 L. usitatissimum v1.0 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Araha.2490s0025.1.p A. halleri v1.1 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Cagra.1968s0053.1.p C. grandiflora v1.1 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Brara.J00072.1.p B. rapa FPsc v1.3 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Bostr.5325s0030.1.p B. stricta v1.2 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Manes.01G239700.1.p M. esculenta v6.1 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
AL1G11440.t1 A. lyrata v2.1 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Podel.14G109100.1.p P. deltoides WV94 v2.1 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Carub.0001s0114.1.p C. rubella v1.1 124244396 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae