Gene : Cagra.1968s0053 C. grandiflora v1.1
Defline:  (1 of 25) KOG0131 - Splicing factor 3b, subunit 4 Genomic Order:  53
Name:  ? Cagra.1968s0053 Secondary Identifier:  ? PAC:28910133
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1968s0053 0.5kb upstream 0.5kb upstream 1847 true Scaffold1968: 175951-177797 Capsella grandiflora
Cagra.1968s0053 0.5kb upstream 0.5kb upstream 500 false Scaffold1968: 177298-177797 Capsella grandiflora
Cagra.1968s0053 0.5kb downstream 0.5kb downstream 1847 true Scaffold1968: 175451-177297 Capsella grandiflora
Cagra.1968s0053 0.5kb downstream 0.5kb downstream 500 false Scaffold1968: 175451-175950 Capsella grandiflora
Cagra.1968s0053 1.0kb upstream 1.0kb upstream 2347 true Scaffold1968: 175951-178297 Capsella grandiflora
Cagra.1968s0053 1.0kb upstream 1.0kb upstream 1000 false Scaffold1968: 177298-178297 Capsella grandiflora
Cagra.1968s0053 1.0kb downstream 1.0kb downstream 2347 true Scaffold1968: 174951-177297 Capsella grandiflora
Cagra.1968s0053 1.0kb downstream 1.0kb downstream 1000 false Scaffold1968: 174951-175950 Capsella grandiflora
Cagra.1968s0053 2.0kb upstream 2.0kb upstream 3347 true Scaffold1968: 175951-179297 Capsella grandiflora
Cagra.1968s0053 2.0kb upstream 2.0kb upstream 2000 false Scaffold1968: 177298-179297 Capsella grandiflora
Cagra.1968s0053 2.0kb downstream 2.0kb downstream 3347 true Scaffold1968: 173951-177297 Capsella grandiflora
Cagra.1968s0053 2.0kb downstream 2.0kb downstream 2000 false Scaffold1968: 173951-175950 Capsella grandiflora
Cagra.1968s0053 5.0kb upstream 5.0kb upstream 6347 true Scaffold1968: 175951-182297 Capsella grandiflora
Cagra.1968s0053 5.0kb upstream 5.0kb upstream 5000 false Scaffold1968: 177298-182297 Capsella grandiflora
Cagra.1968s0053 5.0kb downstream 5.0kb downstream 6347 true Scaffold1968: 170951-177297 Capsella grandiflora
Cagra.1968s0053 5.0kb downstream 5.0kb downstream 5000 false Scaffold1968: 170951-175950 Capsella grandiflora
Cagra.1968s0053 10.0kb upstream 10.0kb upstream 11347 true Scaffold1968: 175951-187297 Capsella grandiflora
Cagra.1968s0053 10.0kb upstream 10.0kb upstream 10000 false Scaffold1968: 177298-187297 Capsella grandiflora
Cagra.1968s0053 10.0kb downstream 10.0kb downstream 11347 true Scaffold1968: 165951-177297 Capsella grandiflora
Cagra.1968s0053 10.0kb downstream 10.0kb downstream 10000 false Scaffold1968: 165951-175950 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374600 5261 Brassicaceae View MSA
123800788 5264 Brassicales-Malvales View MSA
124346119 5266 SBM View MSA
124244396 5268 Malvidae View MSA
124069187 5270 Rosid View MSA
123741814 5271 Pentapetalae View MSA
122770132 5272 Eudicot View MSA
122046053 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310543 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain