Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 121310543

Method ID:  5274 Method Name:  Embryophyte
Sequence Alignment:  View MSA Member Count:  51

51 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30076.t000011 (1 of 1) KOG0106//KOG0114//KOG0131//KOG0146 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) R. communis v0.1 1179   30076: 60680-61858
Cucsa.349780 (1 of 1) KOG0146 - RNA-binding protein ETR-3 (RRM superfamily) C. sativus v1.0 2547   scaffold03487: 978721-981267
orange1.1g022096m.g (1 of 1) KOG0131//KOG0146//KOG4206 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B C. sinensis v1.1 1953   scaffold00001: 3383418-3385370
AT1G01080 (1 of 1) KOG0131//KOG0146 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) A. thaliana TAIR10 1724   Chr1: 45296-47019
Thhalv10008355m.g (1 of 1) KOG0146 - RNA-binding protein ETR-3 (RRM superfamily) E. salsugineum v1.0 1607   scaffold_5: 15224064-15225670
Ciclev10021531m.g (1 of 1) KOG0146 - RNA-binding protein ETR-3 (RRM superfamily) C. clementina v1.0 1914   scaffold_3: 47576123-47578036
Lus10002676.g (1 of 1) KOG0123//KOG0131 - Polyadenylate-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 L. usitatissimum v1.0 1199   scaffold1347: 40934-42132
Lus10030194.g (1 of 37) KOG0131 - Splicing factor 3b, subunit 4 L. usitatissimum v1.0 1198   scaffold217: 171635-172832
Araha.2490s0025 (1 of 25) KOG0131 - Splicing factor 3b, subunit 4 A. halleri v1.1 1607   Scaffold2490: 116467-118073
Cagra.1968s0053 (1 of 25) KOG0131 - Splicing factor 3b, subunit 4 C. grandiflora v1.1 1347   Scaffold1968: 175951-177297
Glyma.07G049500 (1 of 1) KOG0114//KOG0131//KOG0146//KOG4206 - Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B G. max Wm82.a2.v1 2696   Chr07: 4207908-4210603
Glyma.19G260200 (1 of 6) KOG0130 - RNA-binding protein RBM8/Tsunagi (RRM superfamily) G. max Wm82.a2.v1 1554   Chr19: 50359293-50360846
Brara.J00072 (1 of 44) KOG0131 - Splicing factor 3b, subunit 4 B. rapa FPsc v1.3 1315   A10: 366532-367846
Bostr.5325s0030 (1 of 26) KOG0131 - Splicing factor 3b, subunit 4 B. stricta v1.2 1489   Scaffold5325: 203450-204938
SapurV1A.0162s0290 (1 of 1) KOG0131//KOG0146//KOG4206//KOG4210 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B // Nuclear localization sequence binding protein S. purpurea v1.0 2112   chr14: 7961360-7963471
evm_27.TU.AmTr_v1.0_scaffold00100.26 (1 of 1) KOG0146 - RNA-binding protein ETR-3 (RRM superfamily) A. trichopoda v1.0 2044   AmTr_v1.0_scaffold00100: 1007014-1009057
Traes_7DL_4402C8861 (1 of 3) KOG0114//KOG0131 - Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 T. aestivum v2.2 2769   ta_iwgsc_7dl_v1_3351261: 11271-14039
GSMUA_Achr11G06640_001 (1 of 1) KOG0146 - RNA-binding protein ETR-3 (RRM superfamily) M. acuminata v1 3914   chr11: 5218080-5221993
Manes.01G239700 (1 of 1) KOG0114//KOG0131//KOG0144//KOG0146 - Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ETR-3 (RRM superfamily) M. esculenta v6.1 1630   Chromosome01: 31962492-31964121
Seita.6G085200 (1 of 30) KOG0131 - Splicing factor 3b, subunit 4 S. italica v2.2 2521   scaffold_6: 7513635-7516155
Bradi3g13790 (1 of 25) KOG0131 - Splicing factor 3b, subunit 4 B. distachyon v3.1 2518   Bd3: 12332827-12335344
Aco021470 (1 of 1) KOG0114//KOG0131//KOG0144//KOG0146 - Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ETR-3 (RRM superfamily) A. comosus v3 13074   LG07: 9940842-9953915
LOC_Os08g02390 (1 of 28) KOG0131 - Splicing factor 3b, subunit 4 O. sativa v7.0 2482   Chr8: 953683-956164
Zosma104g00220 (1 of 1) KOG0106//KOG0114//KOG0131//KOG0144//KOG4210 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Nuclear localization sequence binding protein Z. marina v2.2 1110   scaffold_104: 374575-375684
Zosma28g01030 (1 of 1) KOG0106//KOG0131//KOG0146//KOG4206//KOG4210 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B // Nuclear localization sequence binding protein Z. marina v2.2 1608   scaffold_28: 817983-819590
Zosma28g01000 (1 of 33) KOG0131 - Splicing factor 3b, subunit 4 Z. marina v2.2 3026   scaffold_28: 807333-810358
Zosma28g01020 (1 of 1) KOG0106//KOG0131//KOG0144//KOG0146//KOG4210 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ETR-3 (RRM superfamily) // Nuclear localization sequence binding protein Z. marina v2.2 1717   scaffold_28: 814618-816334
AL1G11440 (1 of 1) KOG0131//KOG0146 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) A. lyrata v2.1 1688   scaffold_1: 494560-496247
DCAR_006990 (1 of 1) KOG0131//KOG0146 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) D. carota v2.0 1051   DCARv2_Chr2: 30588942-30589992
Phvul.010G119500 (1 of 1) KOG0131//KOG0144 - Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) P. vulgaris v2.1 2465   Chr10: 39973103-39975567

51 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30076.m004447 R. communis v0.1 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
Cucsa.349780.1 C. sativus v1.0 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
orange1.1g022096m C. sinensis v1.1 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
AT1G01080.2 A. thaliana TAIR10 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
Thhalv10008355m E. salsugineum v1.0 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
Ciclev10021531m C. clementina v1.0 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
Lus10002676 L. usitatissimum v1.0 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5274 Embryophyte
Lus10030194 L. usitatissimum v1.0 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5274 Embryophyte
Araha.2490s0025.1.p A. halleri v1.1 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
Cagra.1968s0053.1.p C. grandiflora v1.1 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
Glyma.19G260200.1.p G. max Wm82.a2.v1 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5274 Embryophyte
Glyma.07G049500.1.p G. max Wm82.a2.v1 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5274 Embryophyte
Brara.J00072.1.p B. rapa FPsc v1.3 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
Bostr.5325s0030.1.p B. stricta v1.2 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
SapurV1A.0162s0290.1.p S. purpurea v1.0 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
evm_27.model.AmTr_v1.0_scaffold00100.26 A. trichopoda v1.0 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
Traes_7DL_4402C8861.1 T. aestivum v2.2 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
GSMUA_Achr11P06640_001 M. acuminata v1 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
Manes.01G239700.1.p M. esculenta v6.1 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
Seita.6G085200.1.p S. italica v2.2 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
Bradi3g13790.1.p B. distachyon v3.1 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
Aco021470.1 A. comosus v3 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
LOC_Os08g02390.1 O. sativa v7.0 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
Zosma28g01000.1 Z. marina v2.2 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5274 Embryophyte
Zosma104g00220.1 Z. marina v2.2 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5274 Embryophyte
Zosma28g01030.1 Z. marina v2.2 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5274 Embryophyte
Zosma28g01020.1 Z. marina v2.2 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5274 Embryophyte
AL1G11440.t1 A. lyrata v2.1 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
DCAR_006990 D. carota v2.0 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
Phvul.009G258000.2.p P. vulgaris v2.1 121310543 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5274 Embryophyte