Gene : Glyma.19G260200 G. max Wm82.a2.v1
Defline:  (1 of 6) KOG0130 - RNA-binding protein RBM8/Tsunagi (RRM superfamily) Genomic Order:  2602
Name:  ? Glyma.19G260200 Secondary Identifier:  ? PAC:30512463
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G260200 0.5kb upstream 0.5kb upstream 2054 true Chr19: 50358793-50360846 Glycine max
Glyma.19G260200 0.5kb upstream 0.5kb upstream 500 false Chr19: 50358793-50359292 Glycine max
Glyma.19G260200 0.5kb downstream 0.5kb downstream 2054 true Chr19: 50359293-50361346 Glycine max
Glyma.19G260200 0.5kb downstream 0.5kb downstream 500 false Chr19: 50360847-50361346 Glycine max
Glyma.19G260200 1.0kb upstream 1.0kb upstream 2554 true Chr19: 50358293-50360846 Glycine max
Glyma.19G260200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 50358293-50359292 Glycine max
Glyma.19G260200 1.0kb downstream 1.0kb downstream 2554 true Chr19: 50359293-50361846 Glycine max
Glyma.19G260200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 50360847-50361846 Glycine max
Glyma.19G260200 2.0kb upstream 2.0kb upstream 3554 true Chr19: 50357293-50360846 Glycine max
Glyma.19G260200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 50357293-50359292 Glycine max
Glyma.19G260200 2.0kb downstream 2.0kb downstream 3554 true Chr19: 50359293-50362846 Glycine max
Glyma.19G260200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 50360847-50362846 Glycine max
Glyma.19G260200 5.0kb upstream 5.0kb upstream 6554 true Chr19: 50354293-50360846 Glycine max
Glyma.19G260200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 50354293-50359292 Glycine max
Glyma.19G260200 5.0kb downstream 5.0kb downstream 6554 true Chr19: 50359293-50365846 Glycine max
Glyma.19G260200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 50360847-50365846 Glycine max
Glyma.19G260200 10.0kb upstream 10.0kb upstream 11554 true Chr19: 50349293-50360846 Glycine max
Glyma.19G260200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 50349293-50359292 Glycine max
Glyma.19G260200 10.0kb downstream 10.0kb downstream 11554 true Chr19: 50359293-50370846 Glycine max
Glyma.19G260200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 50360847-50370846 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254588 5265 Fabidae View MSA
124069187 5270 Rosid View MSA
123741814 5271 Pentapetalae View MSA
122770132 5272 Eudicot View MSA
122046053 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310543 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.7603 0.0 52.3576   High
cufflinks 5.53148 0.0 21.1761    
cufflinks 3.39535 0.0 15.1181    
cufflinks 2.33129 0.0 11.9616    
cufflinks 1.46269 0.0 8.1843    
cufflinks 1.40628 0.0 6.12008    
cufflinks 1.99738 0.0 10.6198    
cufflinks 1.61587 0.0 8.946    
cufflinks 1.39395 0.0 7.8326    
cufflinks 0.959        
cufflinks 0.81        
cufflinks 2.387        
cufflinks 0.276       Low
cufflinks 0.326       Low
cufflinks 0.778        
cufflinks 10.288     High High
cufflinks 0.357       Low
cufflinks 2.093        
cufflinks 3.171        
cufflinks 10.769     High High
cufflinks 1.109        
cufflinks 10.4     High High
cufflinks 11.486     High High
cufflinks 1.093        
cufflinks 11.296     High High
cufflinks 0.401       Low

0 Strain