Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 124069187

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  25

25 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30076.t000011 (1 of 1) KOG0106//KOG0114//KOG0131//KOG0146 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) R. communis v0.1 1179   30076: 60680-61858
Cucsa.349780 (1 of 1) KOG0146 - RNA-binding protein ETR-3 (RRM superfamily) C. sativus v1.0 2547   scaffold03487: 978721-981267
orange1.1g022096m.g (1 of 1) KOG0131//KOG0146//KOG4206 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B C. sinensis v1.1 1953   scaffold00001: 3383418-3385370
AT1G01080 (1 of 1) KOG0131//KOG0146 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) A. thaliana TAIR10 1724   Chr1: 45296-47019
Thhalv10008355m.g (1 of 1) KOG0146 - RNA-binding protein ETR-3 (RRM superfamily) E. salsugineum v1.0 1607   scaffold_5: 15224064-15225670
Ciclev10021531m.g (1 of 1) KOG0146 - RNA-binding protein ETR-3 (RRM superfamily) C. clementina v1.0 1914   scaffold_3: 47576123-47578036
Lus10002676.g (1 of 1) KOG0123//KOG0131 - Polyadenylate-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 L. usitatissimum v1.0 1199   scaffold1347: 40934-42132
Lus10030194.g (1 of 37) KOG0131 - Splicing factor 3b, subunit 4 L. usitatissimum v1.0 1198   scaffold217: 171635-172832
Araha.2490s0025 (1 of 25) KOG0131 - Splicing factor 3b, subunit 4 A. halleri v1.1 1607   Scaffold2490: 116467-118073
Cagra.1968s0053 (1 of 25) KOG0131 - Splicing factor 3b, subunit 4 C. grandiflora v1.1 1347   Scaffold1968: 175951-177297
Glyma.07G049500 (1 of 1) KOG0114//KOG0131//KOG0146//KOG4206 - Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B G. max Wm82.a2.v1 2696   Chr07: 4207908-4210603
Glyma.19G260200 (1 of 6) KOG0130 - RNA-binding protein RBM8/Tsunagi (RRM superfamily) G. max Wm82.a2.v1 1554   Chr19: 50359293-50360846
Brara.J00072 (1 of 44) KOG0131 - Splicing factor 3b, subunit 4 B. rapa FPsc v1.3 1315   A10: 366532-367846
Bostr.5325s0030 (1 of 26) KOG0131 - Splicing factor 3b, subunit 4 B. stricta v1.2 1489   Scaffold5325: 203450-204938
SapurV1A.0162s0290 (1 of 1) KOG0131//KOG0146//KOG4206//KOG4210 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B // Nuclear localization sequence binding protein S. purpurea v1.0 2112   chr14: 7961360-7963471
Manes.01G239700 (1 of 1) KOG0114//KOG0131//KOG0144//KOG0146 - Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ETR-3 (RRM superfamily) M. esculenta v6.1 1630   Chromosome01: 31962492-31964121
AL1G11440 (1 of 1) KOG0131//KOG0146 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) A. lyrata v2.1 1688   scaffold_1: 494560-496247
Phvul.010G119500 (1 of 1) KOG0131//KOG0144 - Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) P. vulgaris v2.1 2465   Chr10: 39973103-39975567
Phvul.009G258000 (1 of 8) K13126 - polyadenylate-binding protein (PABPC) P. vulgaris v2.1 1680   Chr09: 37816098-37817777
Potri.014G105800 (1 of 1) KOG0146 - RNA-binding protein ETR-3 (RRM superfamily) P. trichocarpa v3.1 2032   Chr14: 8336309-8338340
Podel.14G109100 (1 of 1) KOG0131//KOG0146//KOG4206 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B P. deltoides WV94 v2.1 2059   Chr14: 7988096-7990154
VIT_215s0048g02560 (1 of 1) KOG0105//KOG0131//KOG0146 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) V. vinifera v2.1 1288   chr15: 16698131-16699418
Carub.0001s0114 (1 of 29) KOG0131 - Splicing factor 3b, subunit 4 C. rubella v1.1 1443   scaffold_1: 398479-399921
MD07G1160000 (1 of 1) KOG0106//KOG0114//KOG0131//KOG0146 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) M. domestica v1.1 1507   Chr07: 23392451-23393957
gene38476-v2.0.a2-hybrid (1 of 2) KOG0106//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) F. vesca v2.0.a2 1579   Fvb7: 14476941-14478519

25 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g022096m C. sinensis v1.1 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Thhalv10008355m E. salsugineum v1.0 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Lus10002676 L. usitatissimum v1.0 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Glyma.07G049500.1.p G. max Wm82.a2.v1 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Glyma.19G260200.1.p G. max Wm82.a2.v1 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
SapurV1A.0162s0290.1.p S. purpurea v1.0 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Potri.014G105800.1.p P. trichocarpa v3.1 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
VIT_215s0048g02560.1 V. vinifera v2.1 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
30076.m004447 R. communis v0.1 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Cucsa.349780.1 C. sativus v1.0 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
AT1G01080.2 A. thaliana TAIR10 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Ciclev10021531m C. clementina v1.0 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Lus10030194 L. usitatissimum v1.0 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Araha.2490s0025.1.p A. halleri v1.1 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Cagra.1968s0053.1.p C. grandiflora v1.1 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Brara.J00072.1.p B. rapa FPsc v1.3 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Bostr.5325s0030.1.p B. stricta v1.2 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Manes.01G239700.1.p M. esculenta v6.1 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
AL1G11440.t1 A. lyrata v2.1 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Phvul.010G119500.1.p P. vulgaris v2.1 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Phvul.009G258000.2.p P. vulgaris v2.1 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Podel.14G109100.1.p P. deltoides WV94 v2.1 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Carub.0001s0114.1.p C. rubella v1.1 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
MD07G1160000 M. domestica v1.1 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
gene38476-v2.0.a2-hybrid.t1 F. vesca v2.0.a2 124069187 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid