Protein Family : RNA helicase, ATP-dependent, SK12/DOB1 protein 124242054

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  18

18 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29702.t000012 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) R. communis v0.1 7992   29702: 98557-106548
orange1.1g002184m.g (1 of 2) PF00270//PF00271//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) C. sinensis v1.1 9611   scaffold00117: 413886-423496
AT2G06990 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) A. thaliana TAIR10 HEN2 6139   Chr2: 2894940-2901078
Thhalv10019987m.g (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) E. salsugineum v1.0 6085   scaffold_13: 6432554-6438638
Ciclev10018695m.g (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) C. clementina v1.0 9731   scaffold_3: 41219276-41229006
Lus10027599.g (1 of 3) PF00270//PF00271//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) L. usitatissimum v1.0 6534   scaffold2: 179844-186377
Gorai.013G211300 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) G. raimondii v2.1 10799   Chr13: 52317728-52328526
Thecc1EG039723 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) T. cacao v1.1 16315   scaffold_9: 22383898-22400212
Araha.14143s0004 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) A. halleri v1.1 5730   Scaffold14143: 10370-16099
Cagra.2331s0002 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) C. grandiflora v1.1 6155   Scaffold2331: 3719-9873
Brara.E03073 (1 of 4) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) B. rapa FPsc v1.3 4874   A05: 25478292-25483165
Bostr.24399s0014 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) B. stricta v1.2 6631   Scaffold24399: 455190-461820
SapurV1A.0001s2510 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) S. purpurea v1.0 8053   chr06: 5808350-5816402
Manes.18G138900 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) M. esculenta v6.1 15602   Chromosome18: 17935727-17951328
AL3G43950 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) A. lyrata v2.1 5977   scaffold_3: 14827192-14833168
Potri.006G078000 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) P. trichocarpa v3.1 9370   Chr06: 5901736-5911105
Podel.06G084300 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) P. deltoides WV94 v2.1 8131   Chr06: 6497795-6505925
Carub.0003s2734 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) C. rubella v1.1 6130   scaffold_3: 10491237-10497366

18 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Ciclev10018695m C. clementina v1.0 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
Cagra.2331s0002.1.p C. grandiflora v1.1 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
Brara.E03073.1.p B. rapa FPsc v1.3 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
SapurV1A.0001s2510.1.p S. purpurea v1.0 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
Podel.06G084300.1.p P. deltoides WV94 v2.1 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
29702.m000175 R. communis v0.1 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
orange1.1g002184m C. sinensis v1.1 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
AT2G06990.1 A. thaliana TAIR10 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
Thhalv10019987m E. salsugineum v1.0 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
Lus10027599 L. usitatissimum v1.0 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
Gorai.013G211300.1 G. raimondii v2.1 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
Thecc1EG039723t1 T. cacao v1.1 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
Araha.14143s0004.1.p A. halleri v1.1 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
Bostr.24399s0014.1.p B. stricta v1.2 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
Manes.18G138900.1.p M. esculenta v6.1 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
AL3G43950.t1 A. lyrata v2.1 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
Potri.006G078000.1.p P. trichocarpa v3.1 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae
Carub.0003s2734.1.p C. rubella v1.1 124242054 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5268 Malvidae