Gene : Thecc1EG039723 T. cacao v1.1
Defline:  (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) Genomic Order:  1948
Name:  ? Thecc1EG039723 Secondary Identifier:  ? PAC:27425649
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG039723 0.5kb upstream 0.5kb upstream 16815 true scaffold_9: 22383398-22400212 Theobroma cacao
Thecc1EG039723 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 22383398-22383897 Theobroma cacao
Thecc1EG039723 0.5kb downstream 0.5kb downstream 16815 true scaffold_9: 22383898-22400712 Theobroma cacao
Thecc1EG039723 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 22400213-22400712 Theobroma cacao
Thecc1EG039723 1.0kb upstream 1.0kb upstream 17315 true scaffold_9: 22382898-22400212 Theobroma cacao
Thecc1EG039723 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 22382898-22383897 Theobroma cacao
Thecc1EG039723 1.0kb downstream 1.0kb downstream 17315 true scaffold_9: 22383898-22401212 Theobroma cacao
Thecc1EG039723 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 22400213-22401212 Theobroma cacao
Thecc1EG039723 2.0kb upstream 2.0kb upstream 18315 true scaffold_9: 22381898-22400212 Theobroma cacao
Thecc1EG039723 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 22381898-22383897 Theobroma cacao
Thecc1EG039723 2.0kb downstream 2.0kb downstream 18315 true scaffold_9: 22383898-22402212 Theobroma cacao
Thecc1EG039723 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 22400213-22402212 Theobroma cacao
Thecc1EG039723 5.0kb upstream 5.0kb upstream 21315 true scaffold_9: 22378898-22400212 Theobroma cacao
Thecc1EG039723 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 22378898-22383897 Theobroma cacao
Thecc1EG039723 5.0kb downstream 5.0kb downstream 21315 true scaffold_9: 22383898-22405212 Theobroma cacao
Thecc1EG039723 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 22400213-22405212 Theobroma cacao
Thecc1EG039723 10.0kb upstream 10.0kb upstream 26315 true scaffold_9: 22373898-22400212 Theobroma cacao
Thecc1EG039723 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 22373898-22383897 Theobroma cacao
Thecc1EG039723 10.0kb downstream 10.0kb downstream 26315 true scaffold_9: 22383898-22410212 Theobroma cacao
Thecc1EG039723 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 22400213-22410212 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830388 5264 Brassicales-Malvales View MSA
124344231 5266 SBM View MSA
124242054 5268 Malvidae View MSA
124068419 5270 Rosid View MSA
123739486 5271 Pentapetalae View MSA
122787494 5272 Eudicot View MSA
122043048 5273 Angiosperm View MSA
121343879 5274 Embryophyte View MSA
123425056 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain