Protein Family : RNA helicase, ATP-dependent, SK12/DOB1 protein 122787494

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  44

44 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29702.t000012 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) R. communis v0.1 7992   29702: 98557-106548
Cucsa.071060 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) C. sativus v1.0 21358   scaffold00737: 19315-40672
orange1.1g002184m.g (1 of 2) PF00270//PF00271//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) C. sinensis v1.1 9611   scaffold00117: 413886-423496
AT2G06990 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) A. thaliana TAIR10 HEN2 6139   Chr2: 2894940-2901078
Thhalv10019987m.g (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) E. salsugineum v1.0 6085   scaffold_13: 6432554-6438638
Ciclev10018695m.g (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) C. clementina v1.0 9731   scaffold_3: 41219276-41229006
Lus10027599.g (1 of 3) PF00270//PF00271//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) L. usitatissimum v1.0 6534   scaffold2: 179844-186377
Gorai.013G211300 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) G. raimondii v2.1 10799   Chr13: 52317728-52328526
Thecc1EG039723 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) T. cacao v1.1 16315   scaffold_9: 22383898-22400212
Migut.J00836 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) M. guttatus v2.0 6926   scaffold_10: 4986764-4993689
Araha.14143s0004 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) A. halleri v1.1 5730   Scaffold14143: 10370-16099
Cagra.2331s0002 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) C. grandiflora v1.1 6155   Scaffold2331: 3719-9873
Glyma.05G221200 (1 of 4) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) G. max Wm82.a2.v1 12283   Chr05: 40060336-40072618
Glyma.08G027700 (1 of 4) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) G. max Wm82.a2.v1 9180   Chr08: 2210646-2219825
Brara.E03073 (1 of 4) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) B. rapa FPsc v1.3 4874   A05: 25478292-25483165
Bostr.24399s0014 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) B. stricta v1.2 6631   Scaffold24399: 455190-461820
Medtr8g101340 (1 of 4) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) M. truncatula Mt4.0v1 9490   chr8: 42543791-42553280
SapurV1A.0001s2510 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) S. purpurea v1.0 8053   chr06: 5808350-5816402
Eucgr.C00066 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) E. grandis v2.0 10637   Chr03: 250472-261108
Prupe.1G065000 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) P. persica v2.1 10020   Pp01: 4619014-4629033
Manes.18G138900 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) M. esculenta v6.1 15602   Chromosome18: 17935727-17951328
Kalax.0082s0063 (1 of 5) PF00270//PF00271//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) K. laxiflora v1.1 6434   scaffold_82: 471614-478047
Aqcoe7G283600 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) A. coerulea v3.1 12273   Chr_07: 30082487-30094759
Kaladp0024s0855 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) K. fedtschenkoi v1.1 6423   Scaffold_24: 7425204-7431626
AL3G43950 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) A. lyrata v2.1 5977   scaffold_3: 14827192-14833168
Tp57577_TGAC_v2_gene25490 (1 of 4) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) T. pratense v2 8092   Tp57577_TGAC_v2_scaf_162: 244706-252797
DCAR_009044 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) D. carota v2.0 8822   DCARv2_Chr3: 3885015-3893836
Solyc05g047520.2 (1 of 3) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) S. lycopersicum ITAG2.4 8242   SL2.50ch05: 59005055-59013296
AUR62020712 (1 of 3) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) C. quinoa v1.0 12327   C_Quinoa_Scaffold_3966: 2870976-2883302
AUR62028012 (1 of 3) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) C. quinoa v1.0 11607   C_Quinoa_Scaffold_2487: 3533561-3545167

44 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.071060.1 C. sativus v1.0 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
Brara.E03073.1.p B. rapa FPsc v1.3 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
Kalax.0082s0063.1.p K. laxiflora v1.1 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
Aqcoe7G283600.1.p A. coerulea v3.1 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
Kaladp0024s0855.1.p K. fedtschenkoi v1.1 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
Tp57577_TGAC_v2_mRNA26359 T. pratense v2 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
AUR62020712-RA C. quinoa v1.0 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 2 5272 Eudicot
AUR62028012-RA C. quinoa v1.0 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 2 5272 Eudicot
Podel.06G084300.1.p P. deltoides WV94 v2.1 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
Lsat_1_v5_gn_5_81421.1 L. sativa V8 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
MD13G1234200 M. domestica v1.1 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 2 5272 Eudicot
Ca_05875 C. arietinum v1.0 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
HanXRQChr10g0309581 H. annuus r1.2 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 2 5272 Eudicot
HanXRQChr12g0359191 H. annuus r1.2 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 2 5272 Eudicot
gene12223-v2.0.a2-hybrid.t3 F. vesca v2.0.a2 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
29702.m000175 R. communis v0.1 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
orange1.1g002184m C. sinensis v1.1 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
AT2G06990.1 A. thaliana TAIR10 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
Thhalv10019987m E. salsugineum v1.0 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
Ciclev10018695m C. clementina v1.0 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
Lus10027599 L. usitatissimum v1.0 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
Gorai.013G211300.1 G. raimondii v2.1 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
Thecc1EG039723t1 T. cacao v1.1 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
Migut.J00836.1.p M. guttatus v2.0 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
Araha.14143s0004.1.p A. halleri v1.1 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
Cagra.2331s0002.1.p C. grandiflora v1.1 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
Glyma.08G027700.1.p G. max Wm82.a2.v1 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 2 5272 Eudicot
Glyma.05G221200.1.p G. max Wm82.a2.v1 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 2 5272 Eudicot
Bostr.24399s0014.1.p B. stricta v1.2 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot
Medtr8g101340.1 M. truncatula Mt4.0v1 122787494 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5272 Eudicot