Protein Family : Nucleotide excision repair, TFIIH, subunit TTDA 124237192

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  17

17 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
AT1G12400 (1 of 2) K10845 - TFIIH basal transcription factor complex TTD-A subunit (TTDA, GTF2H5, TFB5) A. thaliana TAIR10 975   Chr1: 4221863-4222837
Thhalv10009271m.g (1 of 3) PTHR28580:SF1 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 E. salsugineum v1.0 1204   scaffold_5: 11325307-11326510
Lus10000383.g (1 of 3) PTHR28580:SF1 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 L. usitatissimum v1.0 443   scaffold1374: 10298-10740
Lus10006998.g (1 of 3) PTHR28580:SF1 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 L. usitatissimum v1.0 438   scaffold2103: 12263-12700
Lus10007001.g (1 of 3) PTHR28580:SF1 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 L. usitatissimum v1.0 443   scaffold2103: 21793-22235
Gorai.008G240500 (1 of 1) PTHR28580:SF1 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 G. raimondii v2.1 2184   Chr08: 52675278-52677461
Thecc1EG047019 (1 of 1) K10845 - TFIIH basal transcription factor complex TTD-A subunit (TTDA, GTF2H5, TFB5) T. cacao v1.1 3770   scaffold_3: 31252699-31256468
Araha.0650s0003 (1 of 1) PTHR28580:SF1 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 A. halleri v1.1 925   Scaffold650: 6195-7119
Cagra.0568s0148 (1 of 2) PTHR28580:SF1 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 C. grandiflora v1.1 975   Scaffold568: 510062-511036
Brara.F00857 (1 of 2) PTHR28580:SF1 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 B. rapa FPsc v1.3 971   A06: 4852276-4853246
Bostr.6758s0062 (1 of 3) PTHR28580:SF1 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 B. stricta v1.2 189   Scaffold6758: 335045-335233
Bostr.13671s0219 (1 of 3) PTHR28580:SF1 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 B. stricta v1.2 1652   Scaffold13671: 1132490-1134141
SapurV1A.0260s0090 (1 of 1) K10845 - TFIIH basal transcription factor complex TTD-A subunit (TTDA, GTF2H5, TFB5) S. purpurea v1.0 1390   chr01: 7956756-7958145
AL1G23730 (1 of 2) K10845 - TFIIH basal transcription factor complex TTD-A subunit (TTDA, GTF2H5, TFB5) A. lyrata v2.1 983   scaffold_1: 5039668-5040650
Potri.001G116000 (1 of 2) K10845 - TFIIH basal transcription factor complex TTD-A subunit (TTDA, GTF2H5, TFB5) P. trichocarpa v3.1 1502   Chr01: 9297213-9298714
Podel.01G122800 (1 of 1) K10845 - TFIIH basal transcription factor complex TTD-A subunit (TTDA, GTF2H5, TFB5) P. deltoides WV94 v2.1 1279   Chr01: 9884025-9885303
Carub.0001s1205 (1 of 2) K10845 - TFIIH basal transcription factor complex TTD-A subunit (TTDA, GTF2H5, TFB5) C. rubella v1.1 876   scaffold_1: 4300292-4301167

17 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Lus10007001 L. usitatissimum v1.0 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 3 5268 Malvidae
Thecc1EG047019t2 T. cacao v1.1 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 1 5268 Malvidae
Araha.0650s0003.1.p A. halleri v1.1 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 1 5268 Malvidae
Cagra.0568s0148.1.p C. grandiflora v1.1 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 1 5268 Malvidae
Podel.01G122800.1.p P. deltoides WV94 v2.1 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 1 5268 Malvidae
AT1G12400.1 A. thaliana TAIR10 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 1 5268 Malvidae
Thhalv10009271m E. salsugineum v1.0 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 1 5268 Malvidae
Lus10000383 L. usitatissimum v1.0 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 3 5268 Malvidae
Lus10006998 L. usitatissimum v1.0 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 3 5268 Malvidae
Gorai.008G240500.1 G. raimondii v2.1 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 1 5268 Malvidae
Brara.F00857.1.p B. rapa FPsc v1.3 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 1 5268 Malvidae
Bostr.13671s0219.1.p B. stricta v1.2 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 2 5268 Malvidae
Bostr.6758s0062.1.p B. stricta v1.2 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 2 5268 Malvidae
SapurV1A.0260s0090.1.p S. purpurea v1.0 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 1 5268 Malvidae
AL1G23730.t1 A. lyrata v2.1 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 1 5268 Malvidae
Potri.001G116000.3.p P. trichocarpa v3.1 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 1 5268 Malvidae
Carub.0001s1205.1.p C. rubella v1.1 124237192 Nucleotide excision repair, TFIIH, subunit TTDA 1 5268 Malvidae