Protein Family : Squalene synthetase 122180617

Method ID:  5267 Method Name:  Panicoideae
Sequence Alignment:  View MSA Member Count:  10

10 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Seita.4G288600 (1 of 1) PTHR31480:SF2 - PHYTOENE SYNTHASE, CHLOROPLASTIC S. italica v2.2 2994   scaffold_4: 40043909-40046902
Zm00008a024386 (1 of 1) PTHR31480:SF2 - PHYTOENE SYNTHASE, CHLOROPLASTIC Z. mays PH207 v1.1 3549   chr06: 81555811-81559359
Pavir.6KG209400 (1 of 3) PTHR31480:SF2 - PHYTOENE SYNTHASE, CHLOROPLASTIC P. virgatum v4.1 3452   Chr06K: 42265976-42269427
Sobic.010G276400 (1 of 1) PTHR31480//PTHR31480:SF2 - FAMILY NOT NAMED // PHYTOENE SYNTHASE, CHLOROPLASTIC S. bicolor v3.1.1 3900   Chr10: 60960085-60963984
Zm00001d036345 (1 of 8) 2.5.1.32 - 15-cis-phytoene synthase / PSase Z. mays RefGen_V4 3888   6: 85061295-85065182
Pahal.4G004300 (1 of 1) PTHR31480//PTHR31480:SF2 - FAMILY NOT NAMED // PHYTOENE SYNTHASE, CHLOROPLASTIC P. hallii v3.1 3775   Chr04: 206103-209877
PhHAL.4G004900 (1 of 3) K02291 - phytoene synthase (crtB) P. hallii HAL v2.1 3572   Chr04: 276398-279969
Misin19G274200 (1 of 2) PTHR31480//PTHR31480:SF2 - FAMILY NOT NAMED // PHYTOENE SYNTHASE, CHLOROPLASTIC M. sinensis v7.1 4278   Chr19: 87347501-87351778
Misin18G279100 (1 of 2) PTHR31480//PTHR31480:SF2 - FAMILY NOT NAMED // PHYTOENE SYNTHASE, CHLOROPLASTIC M. sinensis v7.1 4003   Chr18: 84088376-84092378
Sevir.4G300900 (1 of 1) PTHR31480//PTHR31480:SF2 - FAMILY NOT NAMED // PHYTOENE SYNTHASE, CHLOROPLASTIC S. viridis v2.1 3472   Chr_04: 39295043-39298514

10 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Seita.4G288600.1.p S. italica v2.2 122180617 Squalene synthetase 1 5267 Panicoideae
Zm00008a024386_P01 Z. mays PH207 v1.1 122180617 Squalene synthetase 1 5267 Panicoideae
Pavir.6KG209400.1.p P. virgatum v4.1 122180617 Squalene synthetase 1 5267 Panicoideae
Sobic.010G276400.2.p S. bicolor v3.1.1 122180617 Squalene synthetase 1 5267 Panicoideae
Zm00001d036345_P002 Z. mays RefGen_V4 122180617 Squalene synthetase 1 5267 Panicoideae
Pahal.4G004300.1.p P. hallii v3.1 122180617 Squalene synthetase 1 5267 Panicoideae
Misin19G274200.1.p M. sinensis v7.1 122180617 Squalene synthetase 2 5267 Panicoideae
Misin18G279100.1.p M. sinensis v7.1 122180617 Squalene synthetase 2 5267 Panicoideae
Sevir.4G300900.1.p S. viridis v2.1 122180617 Squalene synthetase 1 5267 Panicoideae
PhHAL.4G004900.1.p P. hallii HAL v2.1 122180617 Squalene synthetase 1 5267 Panicoideae