Protein Family : Predicted E3 ubiquitin ligase 122176448

Method ID:  5267 Method Name:  Panicoideae
Sequence Alignment:  View MSA Member Count:  10

10 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Seita.1G249200 (1 of 2) PTHR12313//PTHR12313:SF9 - RNF5 S. italica v2.2 3684   scaffold_1: 32512575-32516258
Zm00008a022436 (1 of 1) PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 Z. mays PH207 v1.1 1722   chr05: 186025721-186027442
Pavir.1KG408700 (1 of 4) PTHR12313//PTHR12313:SF9 - RNF5 // SUBFAMILY NOT NAMED P. virgatum v4.1 1047   Chr01K: 64648675-64649721
Pavir.1NG368100 (1 of 4) PTHR12313//PTHR12313:SF9 - RNF5 // SUBFAMILY NOT NAMED P. virgatum v4.1 1867   Chr01N: 76742056-76743922
Sobic.004G228100 (1 of 1) PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 S. bicolor v3.1.1 3744   Chr04: 57762508-57766251
Zm00001d017378 (1 of 1) PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 Z. mays RefGen_V4 768   5: 193867340-193868107
Pahal.1G323900 (1 of 2) PTHR12313//PTHR12313:SF9 - RNF5 // SUBFAMILY NOT NAMED P. hallii v3.1 4625   Chr01: 50789826-50794450
PhHAL.1G315900 (1 of 2) PTHR12313//PTHR12313:SF9 - RNF5 // SUBFAMILY NOT NAMED P. hallii HAL v2.1 4051   Chr01: 49760496-49764546
Misin07G421200 (1 of 2) PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 M. sinensis v7.1 2110   Chr07: 131145401-131147510
Sevir.1G253300 (1 of 2) PTHR12313//PTHR12313:SF9 - RNF5 // SUBFAMILY NOT NAMED S. viridis v2.1 4256   Chr_01: 32220015-32224270

10 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Seita.1G249200.1.p S. italica v2.2 122176448 Predicted E3 ubiquitin ligase 1 5267 Panicoideae
Zm00008a022436_P01 Z. mays PH207 v1.1 122176448 Predicted E3 ubiquitin ligase 1 5267 Panicoideae
Pavir.1NG368100.1.p P. virgatum v4.1 122176448 Predicted E3 ubiquitin ligase 2 5267 Panicoideae
Pavir.1KG408700.1.p P. virgatum v4.1 122176448 Predicted E3 ubiquitin ligase 2 5267 Panicoideae
Zm00001d017378_P001 Z. mays RefGen_V4 122176448 Predicted E3 ubiquitin ligase 1 5267 Panicoideae
Pahal.1G323900.1.p P. hallii v3.1 122176448 Predicted E3 ubiquitin ligase 1 5267 Panicoideae
PhHAL.1G315900.1.p P. hallii HAL v2.1 122176448 Predicted E3 ubiquitin ligase 1 5267 Panicoideae
Sobic.004G228100.2.p S. bicolor v3.1.1 122176448 Predicted E3 ubiquitin ligase 1 5267 Panicoideae
Misin07G421200.1.p M. sinensis v7.1 122176448 Predicted E3 ubiquitin ligase 1 5267 Panicoideae
Sevir.1G253300.3.p S. viridis v2.1 122176448 Predicted E3 ubiquitin ligase 1 5267 Panicoideae