Protein Family : PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED 122237433

Method ID:  5265 Method Name:  Fabidae
Sequence Alignment:  View MSA Member Count:  5

5 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Cucsa.149360 (1 of 21) PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON C. sativus v1.0 3952   scaffold01110: 195445-199396
Cucsa.300520 (1 of 1) PF07727//PF13976//PF14227 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_2) C. sativus v1.0 4018   scaffold02931: 25938-29955
MD01G1101100 (1 of 3) PF00665//PF07727//PF13976//PF14227 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_2) M. domestica v1.1 3987   Chr01: 21412538-21416524
gene30122-v1.0-hybrid (1 of 2) PF00665//PF07727//PF13976//PF14227 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_2) F. vesca v2.0.a2 3975   Fvb6: 9732934-9736908
gene24361-v1.0-hybrid (1 of 2) PF00665//PF07727//PF13976//PF14227 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_2) F. vesca v2.0.a2 4017   Fvb6: 5252929-5256945

5 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.300520.1 C. sativus v1.0 122237433 PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED 2 5265 Fabidae
MD01G1101100 M. domestica v1.1 122237433 PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED 1 5265 Fabidae
gene30122-v1.0-hybrid.t1 F. vesca v2.0.a2 122237433 PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED 2 5265 Fabidae
Cucsa.149360.1 C. sativus v1.0 122237433 PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED 2 5265 Fabidae
gene24361-v1.0-hybrid.t1 F. vesca v2.0.a2 122237433 PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED 2 5265 Fabidae