Gene : gene24361-v1.0-hybrid F. vesca v2.0.a2
Defline:  (1 of 2) PF00665//PF07727//PF13976//PF14227 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_2) Genomic Order:  1025
Name:  ? gene24361-v1.0-hybrid Secondary Identifier:  ? PAC:40654826
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene24361-v1.0-hybrid 0.5kb upstream 0.5kb upstream 4517 true Fvb6: 5252429-5256945 Fragaria vesca
gene24361-v1.0-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb6: 5252429-5252928 Fragaria vesca
gene24361-v1.0-hybrid 0.5kb downstream 0.5kb downstream 4517 true Fvb6: 5252929-5257445 Fragaria vesca
gene24361-v1.0-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb6: 5256946-5257445 Fragaria vesca
gene24361-v1.0-hybrid 1.0kb upstream 1.0kb upstream 5017 true Fvb6: 5251929-5256945 Fragaria vesca
gene24361-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb6: 5251929-5252928 Fragaria vesca
gene24361-v1.0-hybrid 1.0kb downstream 1.0kb downstream 5017 true Fvb6: 5252929-5257945 Fragaria vesca
gene24361-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb6: 5256946-5257945 Fragaria vesca
gene24361-v1.0-hybrid 2.0kb upstream 2.0kb upstream 6017 true Fvb6: 5250929-5256945 Fragaria vesca
gene24361-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb6: 5250929-5252928 Fragaria vesca
gene24361-v1.0-hybrid 2.0kb downstream 2.0kb downstream 6017 true Fvb6: 5252929-5258945 Fragaria vesca
gene24361-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb6: 5256946-5258945 Fragaria vesca
gene24361-v1.0-hybrid 5.0kb upstream 5.0kb upstream 9017 true Fvb6: 5247929-5256945 Fragaria vesca
gene24361-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb6: 5247929-5252928 Fragaria vesca
gene24361-v1.0-hybrid 5.0kb downstream 5.0kb downstream 9017 true Fvb6: 5252929-5261945 Fragaria vesca
gene24361-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb6: 5256946-5261945 Fragaria vesca
gene24361-v1.0-hybrid 10.0kb upstream 10.0kb upstream 14017 true Fvb6: 5242929-5256945 Fragaria vesca
gene24361-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb6: 5242929-5252928 Fragaria vesca
gene24361-v1.0-hybrid 10.0kb downstream 10.0kb downstream 14017 true Fvb6: 5252929-5266945 Fragaria vesca
gene24361-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb6: 5256946-5266945 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029855 5273 Angiosperm View MSA
122237433 5265 Fabidae View MSA
124038205 5270 Rosid View MSA
123753008 5271 Pentapetalae View MSA
122774914 5272 Eudicot View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain