Gene : Cucsa.149360 C. sativus v1.0
Defline:  (1 of 21) PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  23
Name:  ? Cucsa.149360 Secondary Identifier:  ? PAC:16964258
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.149360 0.5kb upstream 0.5kb upstream 4452 true scaffold01110: 195445-199896 Cucumis sativus
Cucsa.149360 0.5kb upstream 0.5kb upstream 500 false scaffold01110: 199397-199896 Cucumis sativus
Cucsa.149360 0.5kb downstream 0.5kb downstream 4452 true scaffold01110: 194945-199396 Cucumis sativus
Cucsa.149360 0.5kb downstream 0.5kb downstream 500 false scaffold01110: 194945-195444 Cucumis sativus
Cucsa.149360 1.0kb upstream 1.0kb upstream 4952 true scaffold01110: 195445-200396 Cucumis sativus
Cucsa.149360 1.0kb upstream 1.0kb upstream 1000 false scaffold01110: 199397-200396 Cucumis sativus
Cucsa.149360 1.0kb downstream 1.0kb downstream 4952 true scaffold01110: 194445-199396 Cucumis sativus
Cucsa.149360 1.0kb downstream 1.0kb downstream 1000 false scaffold01110: 194445-195444 Cucumis sativus
Cucsa.149360 2.0kb upstream 2.0kb upstream 5952 true scaffold01110: 195445-201396 Cucumis sativus
Cucsa.149360 2.0kb upstream 2.0kb upstream 2000 false scaffold01110: 199397-201396 Cucumis sativus
Cucsa.149360 2.0kb downstream 2.0kb downstream 5952 true scaffold01110: 193445-199396 Cucumis sativus
Cucsa.149360 2.0kb downstream 2.0kb downstream 2000 false scaffold01110: 193445-195444 Cucumis sativus
Cucsa.149360 5.0kb upstream 5.0kb upstream 8952 true scaffold01110: 195445-204396 Cucumis sativus
Cucsa.149360 5.0kb upstream 5.0kb upstream 5000 false scaffold01110: 199397-204396 Cucumis sativus
Cucsa.149360 5.0kb downstream 5.0kb downstream 8952 true scaffold01110: 190445-199396 Cucumis sativus
Cucsa.149360 5.0kb downstream 5.0kb downstream 5000 false scaffold01110: 190445-195444 Cucumis sativus
Cucsa.149360 10.0kb upstream 10.0kb upstream 13952 true scaffold01110: 195445-209396 Cucumis sativus
Cucsa.149360 10.0kb upstream 10.0kb upstream 10000 false scaffold01110: 199397-209396 Cucumis sativus
Cucsa.149360 10.0kb downstream 10.0kb downstream 13952 true scaffold01110: 185445-199396 Cucumis sativus
Cucsa.149360 10.0kb downstream 10.0kb downstream 10000 false scaffold01110: 185445-195444 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029855 5273 Angiosperm View MSA
122237433 5265 Fabidae View MSA
124038205 5270 Rosid View MSA
123753008 5271 Pentapetalae View MSA
122774914 5272 Eudicot View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain