Protein Family : Pectin lyase-like superfamily protein 122377836

Method ID:  5261 Method Name:  Brassicaceae
Sequence Alignment:  View MSA Member Count:  10

10 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
AT3G07850 (1 of 3) K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) A. thaliana TAIR10 1982   Chr3: 2505547-2507528
AT3G14040 (1 of 3) K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) A. thaliana TAIR10 1972   Chr3: 4648348-4650319
Thhalv10020501m.g (1 of 1) PTHR31375:SF23 - EXOPOLYGALACTURONASE / GALACTURAN 1,4-ALPHA-GALACTURONIDASE / PECTINASE-RELATED E. salsugineum v1.0 2245   scaffold_13: 6886849-6889093
Brara.E03169 (1 of 3) PTHR31375:SF23 - EXOPOLYGALACTURONASE / GALACTURAN 1,4-ALPHA-GALACTURONIDASE / PECTINASE-RELATED B. rapa FPsc v1.3 2134   A05: 25963746-25965879
Brara.E03170 (1 of 3) PTHR31375:SF23 - EXOPOLYGALACTURONASE / GALACTURAN 1,4-ALPHA-GALACTURONIDASE / PECTINASE-RELATED B. rapa FPsc v1.3 5445   A05: 25967400-25972844
Bostr.22252s0241 (1 of 1) PTHR31375:SF23 - EXOPOLYGALACTURONASE / GALACTURAN 1,4-ALPHA-GALACTURONIDASE / PECTINASE-RELATED B. stricta v1.2 1987   Scaffold22252: 1076774-1078760
AL286U10020 (1 of 3) PTHR31375:SF23 - EXOPOLYGALACTURONASE / GALACTURAN 1,4-ALPHA-GALACTURONIDASE / PECTINASE-RELATED A. lyrata v2.1 1980   scaffold_286: 7542-9521
AL3G19220 (1 of 3) PTHR31375:SF23 - EXOPOLYGALACTURONASE / GALACTURAN 1,4-ALPHA-GALACTURONIDASE / PECTINASE-RELATED A. lyrata v2.1 1948   scaffold_3: 3285113-3287060
AL3G26240 (1 of 1) PF07734//PF12708 - F-box associated (FBA_1) // Pectate lyase superfamily protein (Pectate_lyase_3) A. lyrata v2.1 3532   scaffold_3: 5799675-5803206
Carub.0003s0743 (1 of 2) PTHR31375//PTHR31375:SF23 - FAMILY NOT NAMED // EXOPOLYGALACTURONASE / GALACTURAN 1,4-ALPHA-GALACTURONIDASE / PECTINASE-RELATED C. rubella v1.1 1655   scaffold_3: 2550841-2552495

10 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT3G07850.1 A. thaliana TAIR10 122377836 Pectin lyase-like superfamily protein 2 5261 Brassicaceae
Brara.E03170.1.p B. rapa FPsc v1.3 122377836 Pectin lyase-like superfamily protein 2 5261 Brassicaceae
Carub.0003s0743.1.p C. rubella v1.1 122377836 Pectin lyase-like superfamily protein 1 5261 Brassicaceae
AT3G14040.1 A. thaliana TAIR10 122377836 Pectin lyase-like superfamily protein 2 5261 Brassicaceae
Thhalv10020501m E. salsugineum v1.0 122377836 Pectin lyase-like superfamily protein 1 5261 Brassicaceae
Brara.E03169.1.p B. rapa FPsc v1.3 122377836 Pectin lyase-like superfamily protein 2 5261 Brassicaceae
Bostr.22252s0241.1.p B. stricta v1.2 122377836 Pectin lyase-like superfamily protein 1 5261 Brassicaceae
AL3G19220.t1 A. lyrata v2.1 122377836 Pectin lyase-like superfamily protein 3 5261 Brassicaceae
AL286U10020.t1 A. lyrata v2.1 122377836 Pectin lyase-like superfamily protein 3 5261 Brassicaceae
AL3G26240.t1 A. lyrata v2.1 122377836 Pectin lyase-like superfamily protein 3 5261 Brassicaceae