Gene : Carub.0001s4292 C. rubella v1.1
Defline:  (1 of 3) PF00076//PF07145 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Ataxin-2 C-terminal region (PAM2) Genomic Order:  4292
Name:  ? Carub.0001s4292 Secondary Identifier:  ? PAC:39226992
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4292 0.5kb upstream 0.5kb upstream 2759 true scaffold_1: 18862342-18865100 Capsella rubella
Carub.0001s4292 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 18864601-18865100 Capsella rubella
Carub.0001s4292 0.5kb downstream 0.5kb downstream 2759 true scaffold_1: 18861842-18864600 Capsella rubella
Carub.0001s4292 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 18861842-18862341 Capsella rubella
Carub.0001s4292 1.0kb upstream 1.0kb upstream 3259 true scaffold_1: 18862342-18865600 Capsella rubella
Carub.0001s4292 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 18864601-18865600 Capsella rubella
Carub.0001s4292 1.0kb downstream 1.0kb downstream 3259 true scaffold_1: 18861342-18864600 Capsella rubella
Carub.0001s4292 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 18861342-18862341 Capsella rubella
Carub.0001s4292 2.0kb upstream 2.0kb upstream 4259 true scaffold_1: 18862342-18866600 Capsella rubella
Carub.0001s4292 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 18864601-18866600 Capsella rubella
Carub.0001s4292 2.0kb downstream 2.0kb downstream 4259 true scaffold_1: 18860342-18864600 Capsella rubella
Carub.0001s4292 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 18860342-18862341 Capsella rubella
Carub.0001s4292 5.0kb upstream 5.0kb upstream 7259 true scaffold_1: 18862342-18869600 Capsella rubella
Carub.0001s4292 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 18864601-18869600 Capsella rubella
Carub.0001s4292 5.0kb downstream 5.0kb downstream 7259 true scaffold_1: 18857342-18864600 Capsella rubella
Carub.0001s4292 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 18857342-18862341 Capsella rubella
Carub.0001s4292 10.0kb upstream 10.0kb upstream 12259 true scaffold_1: 18862342-18874600 Capsella rubella
Carub.0001s4292 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 18864601-18874600 Capsella rubella
Carub.0001s4292 10.0kb downstream 10.0kb downstream 12259 true scaffold_1: 18852342-18864600 Capsella rubella
Carub.0001s4292 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 18852342-18862341 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366376 5261 Brassicaceae View MSA
123837031 5264 Brassicales-Malvales View MSA
124339957 5266 SBM View MSA
124251598 5268 Malvidae View MSA
124064964 5270 Rosid View MSA
123740266 5271 Pentapetalae View MSA
122794524 5272 Eudicot View MSA
122049515 5273 Angiosperm View MSA
121344395 5274 Embryophyte View MSA
123428747 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain