Gene : Carub.0005s2886 C. rubella v1.1
Defline:  (1 of 35) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) Genomic Order:  2886
Name:  ? Carub.0005s2886 Secondary Identifier:  ? PAC:39226444
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2886 0.5kb upstream 0.5kb upstream 3579 true scaffold_5: 13263281-13266859 Capsella rubella
Carub.0005s2886 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13266360-13266859 Capsella rubella
Carub.0005s2886 0.5kb downstream 0.5kb downstream 3579 true scaffold_5: 13262781-13266359 Capsella rubella
Carub.0005s2886 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13262781-13263280 Capsella rubella
Carub.0005s2886 1.0kb upstream 1.0kb upstream 4079 true scaffold_5: 13263281-13267359 Capsella rubella
Carub.0005s2886 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13266360-13267359 Capsella rubella
Carub.0005s2886 1.0kb downstream 1.0kb downstream 4079 true scaffold_5: 13262281-13266359 Capsella rubella
Carub.0005s2886 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13262281-13263280 Capsella rubella
Carub.0005s2886 2.0kb upstream 2.0kb upstream 5079 true scaffold_5: 13263281-13268359 Capsella rubella
Carub.0005s2886 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13266360-13268359 Capsella rubella
Carub.0005s2886 2.0kb downstream 2.0kb downstream 5079 true scaffold_5: 13261281-13266359 Capsella rubella
Carub.0005s2886 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13261281-13263280 Capsella rubella
Carub.0005s2886 5.0kb upstream 5.0kb upstream 8079 true scaffold_5: 13263281-13271359 Capsella rubella
Carub.0005s2886 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13266360-13271359 Capsella rubella
Carub.0005s2886 5.0kb downstream 5.0kb downstream 8079 true scaffold_5: 13258281-13266359 Capsella rubella
Carub.0005s2886 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13258281-13263280 Capsella rubella
Carub.0005s2886 10.0kb upstream 10.0kb upstream 13079 true scaffold_5: 13263281-13276359 Capsella rubella
Carub.0005s2886 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13266360-13276359 Capsella rubella
Carub.0005s2886 10.0kb downstream 10.0kb downstream 13079 true scaffold_5: 13253281-13266359 Capsella rubella
Carub.0005s2886 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13253281-13263280 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369639 5261 Brassicaceae View MSA
123840280 5264 Brassicales-Malvales View MSA
124337624 5266 SBM View MSA
124253369 5268 Malvidae View MSA
124067536 5270 Rosid View MSA
123744386 5271 Pentapetalae View MSA
122790869 5272 Eudicot View MSA
122045160 5273 Angiosperm View MSA
121348435 5274 Embryophyte View MSA
123380865 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain