Protein Family : Pectin lyase-like superfamily protein 124067536

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  39

39 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
56826.t000002 (1 of 28) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) R. communis v0.1 2305   56826: 3555-5859
orange1.1g012308m.g (1 of 28) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) C. sinensis v1.1 3437   scaffold00001: 3819061-3822497
AT3G62110 (1 of 33) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) A. thaliana TAIR10 3011   Chr3: 22997031-23000041
Thhalv10005945m.g (1 of 36) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) E. salsugineum v1.0 3124   scaffold_19: 452391-455514
Ciclev10020035m.g (1 of 18) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) C. clementina v1.0 3488   scaffold_3: 47112186-47115673
Lus10038030.g (1 of 50) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) L. usitatissimum v1.0 1994   scaffold475: 937571-939564
Gorai.004G147300 (1 of 45) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) G. raimondii v2.1 3549   Chr04: 41528557-41532105
Gorai.008G134500 (1 of 45) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) G. raimondii v2.1 3509   Chr08: 38232683-38236191
Thecc1EG004948 (1 of 3) PF12708//PF13229 - Pectate lyase superfamily protein (Pectate_lyase_3) // Right handed beta helix region (Beta_helix) T. cacao v1.1 3982   scaffold_1: 34280151-34284132
Cagra.0483s0033 (1 of 33) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) C. grandiflora v1.1 3387   Scaffold483: 100254-103640
Glyma.10G138100 (1 of 62) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) G. max Wm82.a2.v1 4291   Chr10: 37181749-37186039
Glyma.02G007600 (1 of 62) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) G. max Wm82.a2.v1 5016   Chr02: 785557-790572
Glyma.03G224600 (1 of 62) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) G. max Wm82.a2.v1 3721   Chr03: 42691388-42695108
Glyma.19G221600 (1 of 62) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) G. max Wm82.a2.v1 4097   Chr19: 47338816-47342912
Brara.G01955 (1 of 54) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) B. rapa FPsc v1.3 2863   A07: 17833609-17836471
Brara.I04295 (1 of 54) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) B. rapa FPsc v1.3 3109   A09: 37898099-37901207
Bostr.13158s0216 (1 of 32) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) B. stricta v1.2 3094   Scaffold13158: 1051253-1054346
Medtr1g086030 (1 of 45) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) M. truncatula Mt4.0v1 3767   chr1: 38484669-38488435
Medtr7g110710 (1 of 45) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) M. truncatula Mt4.0v1 4376   chr7: 45367344-45371719
SapurV1A.1064s0030 (1 of 2) PF00295//PF12708 - Glycosyl hydrolases family 28 (Glyco_hydro_28) // Pectate lyase superfamily protein (Pectate_lyase_3) S. purpurea v1.0 5590   chr14: 8658393-8663982
Eucgr.K00562 (1 of 45) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) E. grandis v2.0 4797   Chr11: 6264541-6269337
Prupe.3G002500 (1 of 47) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) P. persica v2.1 4387   Pp03: 169848-174234
Manes.05G008800 (1 of 60) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) M. esculenta v6.1 3745   Chromosome05: 577649-581393
Manes.01G235200 (1 of 60) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) M. esculenta v6.1 4006   Chromosome01: 31699126-31703131
AL5G29560 (1 of 36) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) A. lyrata v2.1 3170   scaffold_5: 14654508-14657677
AL5G44850 (1 of 36) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) A. lyrata v2.1 3168   scaffold_5: 20697989-20701156
Tp57577_TGAC_v2_gene2463 (1 of 34) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) T. pratense v2 3423   Tp57577_TGAC_v2_LG1: 603521-606943
Tp57577_TGAC_v2_gene3042 (1 of 34) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) T. pratense v2 2473   Tp57577_TGAC_v2_LG1: 21656950-21659422
Phvul.001G218400 (1 of 32) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) P. vulgaris v2.1 3842   Chr01: 47398501-47402342
Phvul.007G209200 (1 of 32) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) P. vulgaris v2.1 3828   Chr07: 33138394-33142221

39 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT3G62110.1 A. thaliana TAIR10 124067536 Pectin lyase-like superfamily protein 1 5270 Rosid
Gorai.004G147300.1 G. raimondii v2.1 124067536 Pectin lyase-like superfamily protein 2 5270 Rosid
Gorai.008G134500.1 G. raimondii v2.1 124067536 Pectin lyase-like superfamily protein 2 5270 Rosid
Glyma.10G138100.1.p G. max Wm82.a2.v1 124067536 Pectin lyase-like superfamily protein 4 5270 Rosid
Glyma.02G007600.1.p G. max Wm82.a2.v1 124067536 Pectin lyase-like superfamily protein 4 5270 Rosid
Bostr.13158s0216.1.p B. stricta v1.2 124067536 Pectin lyase-like superfamily protein 1 5270 Rosid
SapurV1A.1064s0030.1.p S. purpurea v1.0 124067536 Pectin lyase-like superfamily protein 1 5270 Rosid
Tp57577_TGAC_v2_mRNA3132 T. pratense v2 124067536 Pectin lyase-like superfamily protein 2 5270 Rosid
Tp57577_TGAC_v2_mRNA2529 T. pratense v2 124067536 Pectin lyase-like superfamily protein 2 5270 Rosid
Potri.014G112100.1.p P. trichocarpa v3.1 124067536 Pectin lyase-like superfamily protein 2 5270 Rosid
Podel.02G206200.1.p P. deltoides WV94 v2.1 124067536 Pectin lyase-like superfamily protein 2 5270 Rosid
MD09G1290500 M. domestica v1.1 124067536 Pectin lyase-like superfamily protein 1 5270 Rosid
gene24477-v2.0.a2-hybrid.t1 F. vesca v2.0.a2 124067536 Pectin lyase-like superfamily protein 1 5270 Rosid
56826.m000027 R. communis v0.1 124067536 Pectin lyase-like superfamily protein 1 5270 Rosid
orange1.1g012308m C. sinensis v1.1 124067536 Pectin lyase-like superfamily protein 1 5270 Rosid
Thhalv10005945m E. salsugineum v1.0 124067536 Pectin lyase-like superfamily protein 1 5270 Rosid
Ciclev10020035m C. clementina v1.0 124067536 Pectin lyase-like superfamily protein 1 5270 Rosid
Lus10038030 L. usitatissimum v1.0 124067536 Pectin lyase-like superfamily protein 1 5270 Rosid
Thecc1EG004948t1 T. cacao v1.1 124067536 Pectin lyase-like superfamily protein 1 5270 Rosid
Cagra.0483s0033.1.p C. grandiflora v1.1 124067536 Pectin lyase-like superfamily protein 1 5270 Rosid
Glyma.03G224600.1.p G. max Wm82.a2.v1 124067536 Pectin lyase-like superfamily protein 4 5270 Rosid
Glyma.19G221600.1.p G. max Wm82.a2.v1 124067536 Pectin lyase-like superfamily protein 4 5270 Rosid
Brara.G01955.1.p B. rapa FPsc v1.3 124067536 Pectin lyase-like superfamily protein 2 5270 Rosid
Brara.I04295.1.p B. rapa FPsc v1.3 124067536 Pectin lyase-like superfamily protein 2 5270 Rosid
Medtr7g110710.2 M. truncatula Mt4.0v1 124067536 Pectin lyase-like superfamily protein 2 5270 Rosid
Medtr1g086030.1 M. truncatula Mt4.0v1 124067536 Pectin lyase-like superfamily protein 2 5270 Rosid
Eucgr.K00562.1.p E. grandis v2.0 124067536 Pectin lyase-like superfamily protein 1 5270 Rosid
Prupe.3G002500.1.p P. persica v2.1 124067536 Pectin lyase-like superfamily protein 1 5270 Rosid
Manes.01G235200.1.p M. esculenta v6.1 124067536 Pectin lyase-like superfamily protein 2 5270 Rosid
Manes.05G008800.1.p M. esculenta v6.1 124067536 Pectin lyase-like superfamily protein 2 5270 Rosid