Gene : AL5G29560 A. lyrata v2.1
Defline:  (1 of 36) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) Genomic Order:  1699
Name:  ? AL5G29560 Secondary Identifier:  ? PAC:35919486
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G29560 0.5kb upstream 0.5kb upstream 3670   true scaffold_5: 14654008-14657677 Arabidopsis lyrata
AL5G29560 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 14654008-14654507 Arabidopsis lyrata
AL5G29560 0.5kb downstream 0.5kb downstream 3670   true scaffold_5: 14654508-14658177 Arabidopsis lyrata
AL5G29560 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 14657678-14658177 Arabidopsis lyrata
AL5G29560 1.0kb upstream 1.0kb upstream 4170   true scaffold_5: 14653508-14657677 Arabidopsis lyrata
AL5G29560 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 14653508-14654507 Arabidopsis lyrata
AL5G29560 1.0kb downstream 1.0kb downstream 4170   true scaffold_5: 14654508-14658677 Arabidopsis lyrata
AL5G29560 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 14657678-14658677 Arabidopsis lyrata
AL5G29560 2.0kb upstream 2.0kb upstream 5170   true scaffold_5: 14652508-14657677 Arabidopsis lyrata
AL5G29560 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 14652508-14654507 Arabidopsis lyrata
AL5G29560 2.0kb downstream 2.0kb downstream 5170   true scaffold_5: 14654508-14659677 Arabidopsis lyrata
AL5G29560 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 14657678-14659677 Arabidopsis lyrata
AL5G29560 5.0kb upstream 5.0kb upstream 8170   true scaffold_5: 14649508-14657677 Arabidopsis lyrata
AL5G29560 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 14649508-14654507 Arabidopsis lyrata
AL5G29560 5.0kb downstream 5.0kb downstream 8170   true scaffold_5: 14654508-14662677 Arabidopsis lyrata
AL5G29560 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 14657678-14662677 Arabidopsis lyrata
AL5G29560 10.0kb upstream 10.0kb upstream 13170   true scaffold_5: 14644508-14657677 Arabidopsis lyrata
AL5G29560 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 14644508-14654507 Arabidopsis lyrata
AL5G29560 10.0kb downstream 10.0kb downstream 13170   true scaffold_5: 14654508-14667677 Arabidopsis lyrata
AL5G29560 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 14657678-14667677 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369639 5261 Brassicaceae View MSA
123840280 5264 Brassicales-Malvales View MSA
124337624 5266 SBM View MSA
124253369 5268 Malvidae View MSA
124067536 5270 Rosid View MSA
123744386 5271 Pentapetalae View MSA
122790869 5272 Eudicot View MSA
122045160 5273 Angiosperm View MSA
121348435 5274 Embryophyte View MSA
123380865 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain