Protein Family : Pectin lyase-like superfamily protein 124253369

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  23

23 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
56826.t000002 (1 of 28) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) R. communis v0.1 2305   56826: 3555-5859
orange1.1g012308m.g (1 of 28) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) C. sinensis v1.1 3437   scaffold00001: 3819061-3822497
AT3G62110 (1 of 33) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) A. thaliana TAIR10 3011   Chr3: 22997031-23000041
Thhalv10005945m.g (1 of 36) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) E. salsugineum v1.0 3124   scaffold_19: 452391-455514
Ciclev10020035m.g (1 of 18) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) C. clementina v1.0 3488   scaffold_3: 47112186-47115673
Lus10038030.g (1 of 50) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) L. usitatissimum v1.0 1994   scaffold475: 937571-939564
Gorai.004G147300 (1 of 45) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) G. raimondii v2.1 3549   Chr04: 41528557-41532105
Gorai.008G134500 (1 of 45) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) G. raimondii v2.1 3509   Chr08: 38232683-38236191
Thecc1EG004948 (1 of 3) PF12708//PF13229 - Pectate lyase superfamily protein (Pectate_lyase_3) // Right handed beta helix region (Beta_helix) T. cacao v1.1 3982   scaffold_1: 34280151-34284132
Cagra.0483s0033 (1 of 33) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) C. grandiflora v1.1 3387   Scaffold483: 100254-103640
Brara.G01955 (1 of 54) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) B. rapa FPsc v1.3 2863   A07: 17833609-17836471
Brara.I04295 (1 of 54) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) B. rapa FPsc v1.3 3109   A09: 37898099-37901207
Bostr.13158s0216 (1 of 32) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) B. stricta v1.2 3094   Scaffold13158: 1051253-1054346
SapurV1A.1064s0030 (1 of 2) PF00295//PF12708 - Glycosyl hydrolases family 28 (Glyco_hydro_28) // Pectate lyase superfamily protein (Pectate_lyase_3) S. purpurea v1.0 5590   chr14: 8658393-8663982
Manes.05G008800 (1 of 60) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) M. esculenta v6.1 3745   Chromosome05: 577649-581393
Manes.01G235200 (1 of 60) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) M. esculenta v6.1 4006   Chromosome01: 31699126-31703131
AL5G29560 (1 of 36) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) A. lyrata v2.1 3170   scaffold_5: 14654508-14657677
AL5G44850 (1 of 36) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) A. lyrata v2.1 3168   scaffold_5: 20697989-20701156
Potri.002G186900 (1 of 49) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) P. trichocarpa v3.1 3784   Chr02: 14672609-14676392
Potri.014G112100 (1 of 49) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) P. trichocarpa v3.1 4452   Chr14: 8778918-8783369
Podel.14G115900 (1 of 49) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) P. deltoides WV94 v2.1 4139   Chr14: 8542782-8546920
Podel.02G206200 (1 of 49) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) P. deltoides WV94 v2.1 4179   Chr02: 16430513-16434691
Carub.0005s2886 (1 of 35) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) C. rubella v1.1 3079   scaffold_5: 13263281-13266359

23 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT3G62110.1 A. thaliana TAIR10 124253369 Pectin lyase-like superfamily protein 1 5268 Malvidae
Gorai.004G147300.1 G. raimondii v2.1 124253369 Pectin lyase-like superfamily protein 2 5268 Malvidae
Gorai.008G134500.1 G. raimondii v2.1 124253369 Pectin lyase-like superfamily protein 2 5268 Malvidae
Bostr.13158s0216.1.p B. stricta v1.2 124253369 Pectin lyase-like superfamily protein 1 5268 Malvidae
Potri.014G112100.1.p P. trichocarpa v3.1 124253369 Pectin lyase-like superfamily protein 2 5268 Malvidae
Podel.02G206200.1.p P. deltoides WV94 v2.1 124253369 Pectin lyase-like superfamily protein 2 5268 Malvidae
56826.m000027 R. communis v0.1 124253369 Pectin lyase-like superfamily protein 1 5268 Malvidae
orange1.1g012308m C. sinensis v1.1 124253369 Pectin lyase-like superfamily protein 1 5268 Malvidae
Thhalv10005945m E. salsugineum v1.0 124253369 Pectin lyase-like superfamily protein 1 5268 Malvidae
Ciclev10020035m C. clementina v1.0 124253369 Pectin lyase-like superfamily protein 1 5268 Malvidae
Lus10038030 L. usitatissimum v1.0 124253369 Pectin lyase-like superfamily protein 1 5268 Malvidae
Thecc1EG004948t1 T. cacao v1.1 124253369 Pectin lyase-like superfamily protein 1 5268 Malvidae
Cagra.0483s0033.1.p C. grandiflora v1.1 124253369 Pectin lyase-like superfamily protein 1 5268 Malvidae
Brara.G01955.1.p B. rapa FPsc v1.3 124253369 Pectin lyase-like superfamily protein 2 5268 Malvidae
Brara.I04295.1.p B. rapa FPsc v1.3 124253369 Pectin lyase-like superfamily protein 2 5268 Malvidae
SapurV1A.1064s0030.1.p S. purpurea v1.0 124253369 Pectin lyase-like superfamily protein 1 5268 Malvidae
Manes.01G235200.1.p M. esculenta v6.1 124253369 Pectin lyase-like superfamily protein 2 5268 Malvidae
Manes.05G008800.1.p M. esculenta v6.1 124253369 Pectin lyase-like superfamily protein 2 5268 Malvidae
AL5G29560.t1 A. lyrata v2.1 124253369 Pectin lyase-like superfamily protein 2 5268 Malvidae
AL5G44850.t1 A. lyrata v2.1 124253369 Pectin lyase-like superfamily protein 2 5268 Malvidae
Potri.002G186900.2.p P. trichocarpa v3.1 124253369 Pectin lyase-like superfamily protein 2 5268 Malvidae
Podel.14G115900.1.p P. deltoides WV94 v2.1 124253369 Pectin lyase-like superfamily protein 2 5268 Malvidae
Carub.0005s2886.1.p C. rubella v1.1 124253369 Pectin lyase-like superfamily protein 1 5268 Malvidae