Gene : Gorai.008G134500 G. raimondii v2.1
Defline:  (1 of 45) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) Genomic Order:  1345
Name:  ? Gorai.008G134500 Secondary Identifier:  ? PAC:26817582
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G134500 0.5kb upstream 0.5kb upstream 4009 true Chr08: 38232683-38236691 Gossypium raimondii
Gorai.008G134500 0.5kb upstream 0.5kb upstream 500 false Chr08: 38236192-38236691 Gossypium raimondii
Gorai.008G134500 0.5kb downstream 0.5kb downstream 4009 true Chr08: 38232183-38236191 Gossypium raimondii
Gorai.008G134500 0.5kb downstream 0.5kb downstream 500 false Chr08: 38232183-38232682 Gossypium raimondii
Gorai.008G134500 1.0kb upstream 1.0kb upstream 4509 true Chr08: 38232683-38237191 Gossypium raimondii
Gorai.008G134500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 38236192-38237191 Gossypium raimondii
Gorai.008G134500 1.0kb downstream 1.0kb downstream 4509 true Chr08: 38231683-38236191 Gossypium raimondii
Gorai.008G134500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 38231683-38232682 Gossypium raimondii
Gorai.008G134500 2.0kb upstream 2.0kb upstream 5509 true Chr08: 38232683-38238191 Gossypium raimondii
Gorai.008G134500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 38236192-38238191 Gossypium raimondii
Gorai.008G134500 2.0kb downstream 2.0kb downstream 5509 true Chr08: 38230683-38236191 Gossypium raimondii
Gorai.008G134500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 38230683-38232682 Gossypium raimondii
Gorai.008G134500 5.0kb upstream 5.0kb upstream 8509 true Chr08: 38232683-38241191 Gossypium raimondii
Gorai.008G134500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 38236192-38241191 Gossypium raimondii
Gorai.008G134500 5.0kb downstream 5.0kb downstream 8509 true Chr08: 38227683-38236191 Gossypium raimondii
Gorai.008G134500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 38227683-38232682 Gossypium raimondii
Gorai.008G134500 10.0kb upstream 10.0kb upstream 13509 true Chr08: 38232683-38246191 Gossypium raimondii
Gorai.008G134500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 38236192-38246191 Gossypium raimondii
Gorai.008G134500 10.0kb downstream 10.0kb downstream 13509 true Chr08: 38222683-38236191 Gossypium raimondii
Gorai.008G134500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 38222683-38232682 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840280 5264 Brassicales-Malvales View MSA
124337624 5266 SBM View MSA
124253369 5268 Malvidae View MSA
124067536 5270 Rosid View MSA
123744386 5271 Pentapetalae View MSA
122790869 5272 Eudicot View MSA
122045160 5273 Angiosperm View MSA
121348435 5274 Embryophyte View MSA
123380865 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain