Protein Family : polygalacturonase, putative, expressed 121348435

Method ID:  5274 Method Name:  Embryophyte
Sequence Alignment:  View MSA Member Count:  289

289 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
124011 (1 of 8) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) S. moellendorffii v1.0 2021   scaffold_73: 192886-194906
33152 (1 of 8) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) S. moellendorffii v1.0 1793   scaffold_0: 3175334-3177126
29726.t000217 (1 of 1) PTHR31339:SF15 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED R. communis v0.1 3130   29726: 1218532-1221661
30137.t000013 (1 of 1) PTHR31339:SF4 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN R. communis v0.1 3965   30137: 248124-252088
56826.t000002 (1 of 28) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) R. communis v0.1 2305   56826: 3555-5859
Cucsa.228510 (1 of 1) PTHR31339:SF4 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN C. sativus v1.0 3632   scaffold01933: 399421-403052
Cucsa.252790 (1 of 1) PTHR31339:SF15 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED C. sativus v1.0 4011   scaffold02229: 1652198-1656208
orange1.1g012788m.g (1 of 2) PTHR31339:SF15 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED C. sinensis v1.1 3324   scaffold00016: 530730-534053
orange1.1g020062m.g (1 of 2) PF13229 - Right handed beta helix region (Beta_helix) C. sinensis v1.1 3928   scaffold00213: 210344-214271
orange1.1g012308m.g (1 of 28) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) C. sinensis v1.1 3437   scaffold00001: 3819061-3822497
AT3G62110 (1 of 33) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) A. thaliana TAIR10 3011   Chr3: 22997031-23000041
AT4G33440 (1 of 1) PTHR31339:SF4 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN A. thaliana TAIR10 3019   Chr4: 16091940-16094958
AT5G49215 (1 of 3) PTHR31339:SF15 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED A. thaliana TAIR10 2630   Chr5: 19953487-19956116
AT3G06770 (1 of 3) PTHR31339:SF15 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED A. thaliana TAIR10 2429   Chr3: 2134800-2137228
AT3G16850 (1 of 3) PTHR31339:SF15 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED A. thaliana TAIR10 2728   Chr3: 5748570-5751297
Thhalv10025100m.g (1 of 1) PTHR31339:SF4 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN E. salsugineum v1.0 2685   scaffold_1: 2771574-2774258
Thhalv10020710m.g (1 of 3) PTHR31339:SF15 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED E. salsugineum v1.0 2846   scaffold_13: 3612388-3615233
Thhalv10020733m.g (1 of 3) PTHR31339:SF15 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED E. salsugineum v1.0 2227   scaffold_13: 7247944-7250170
Thhalv10005945m.g (1 of 36) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) E. salsugineum v1.0 3124   scaffold_19: 452391-455514
Thhalv10004215m.g (1 of 3) PTHR31339:SF15 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED E. salsugineum v1.0 2734   scaffold_6: 4694800-4697533
Ciclev10003286m.g (1 of 1) PTHR31339:SF4 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN C. clementina v1.0 3317   scaffold_5: 17805801-17809117
Ciclev10020035m.g (1 of 18) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) C. clementina v1.0 3488   scaffold_3: 47112186-47115673
Ciclev10004942m.g (1 of 1) PTHR31339:SF15 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED C. clementina v1.0 3763   scaffold_9: 1320160-1323922
Lus10016837.g (1 of 2) PTHR31339:SF15 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED L. usitatissimum v1.0 2960   scaffold153: 127860-130819
Lus10014799.g (1 of 2) PTHR31339:SF4 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN L. usitatissimum v1.0 3159   scaffold184: 241845-245003
Lus10037714.g (1 of 2) PTHR31339:SF15 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED L. usitatissimum v1.0 2901   scaffold196: 1206381-1209281
Lus10038030.g (1 of 50) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) L. usitatissimum v1.0 1994   scaffold475: 937571-939564
Lus10003589.g (1 of 2) PTHR31339:SF4 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN L. usitatissimum v1.0 3170   scaffold483: 2179-5348
Gorai.003G066600 (1 of 2) PTHR31339:SF4 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN G. raimondii v2.1 4598   Chr03: 13570900-13575497
Gorai.004G147300 (1 of 45) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) G. raimondii v2.1 3549   Chr04: 41528557-41532105

289 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
33152 S. moellendorffii v1.0 121348435 polygalacturonase, putative, expressed 2 5274 Embryophyte
124011 S. moellendorffii v1.0 121348435 polygalacturonase, putative, expressed 2 5274 Embryophyte
56826.m000027 R. communis v0.1 121348435 polygalacturonase, putative, expressed 3 5274 Embryophyte
30137.m000440 R. communis v0.1 121348435 polygalacturonase, putative, expressed 3 5274 Embryophyte
29726.m004105 R. communis v0.1 121348435 polygalacturonase, putative, expressed 3 5274 Embryophyte
Cucsa.228510.1 C. sativus v1.0 121348435 polygalacturonase, putative, expressed 2 5274 Embryophyte
Cucsa.252790.1 C. sativus v1.0 121348435 polygalacturonase, putative, expressed 2 5274 Embryophyte
orange1.1g012308m C. sinensis v1.1 121348435 polygalacturonase, putative, expressed 3 5274 Embryophyte
orange1.1g020062m C. sinensis v1.1 121348435 polygalacturonase, putative, expressed 3 5274 Embryophyte
orange1.1g012788m C. sinensis v1.1 121348435 polygalacturonase, putative, expressed 3 5274 Embryophyte
AT5G49215.1 A. thaliana TAIR10 121348435 polygalacturonase, putative, expressed 5 5274 Embryophyte
AT3G16850.1 A. thaliana TAIR10 121348435 polygalacturonase, putative, expressed 5 5274 Embryophyte
AT3G06770.2 A. thaliana TAIR10 121348435 polygalacturonase, putative, expressed 5 5274 Embryophyte
AT3G62110.1 A. thaliana TAIR10 121348435 polygalacturonase, putative, expressed 5 5274 Embryophyte
AT4G33440.1 A. thaliana TAIR10 121348435 polygalacturonase, putative, expressed 5 5274 Embryophyte
Thhalv10020710m E. salsugineum v1.0 121348435 polygalacturonase, putative, expressed 5 5274 Embryophyte
Thhalv10020733m E. salsugineum v1.0 121348435 polygalacturonase, putative, expressed 5 5274 Embryophyte
Thhalv10004215m E. salsugineum v1.0 121348435 polygalacturonase, putative, expressed 5 5274 Embryophyte
Thhalv10025100m E. salsugineum v1.0 121348435 polygalacturonase, putative, expressed 5 5274 Embryophyte
Thhalv10005945m E. salsugineum v1.0 121348435 polygalacturonase, putative, expressed 5 5274 Embryophyte
Ciclev10004942m C. clementina v1.0 121348435 polygalacturonase, putative, expressed 3 5274 Embryophyte
Ciclev10003286m C. clementina v1.0 121348435 polygalacturonase, putative, expressed 3 5274 Embryophyte
Ciclev10020035m C. clementina v1.0 121348435 polygalacturonase, putative, expressed 3 5274 Embryophyte
Lus10038030 L. usitatissimum v1.0 121348435 polygalacturonase, putative, expressed 5 5274 Embryophyte
Lus10016837 L. usitatissimum v1.0 121348435 polygalacturonase, putative, expressed 5 5274 Embryophyte
Lus10014799 L. usitatissimum v1.0 121348435 polygalacturonase, putative, expressed 5 5274 Embryophyte
Lus10037714 L. usitatissimum v1.0 121348435 polygalacturonase, putative, expressed 5 5274 Embryophyte
Lus10003589 L. usitatissimum v1.0 121348435 polygalacturonase, putative, expressed 5 5274 Embryophyte
Gorai.003G066600.1 G. raimondii v2.1 121348435 polygalacturonase, putative, expressed 6 5274 Embryophyte
Gorai.011G194200.1 G. raimondii v2.1 121348435 polygalacturonase, putative, expressed 6 5274 Embryophyte