Gene : Carub.0004s0071 C. rubella v1.1
Defline:  (1 of 247) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  71
Name:  ? Carub.0004s0071 Secondary Identifier:  ? PAC:39237367
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0071 0.5kb upstream 0.5kb upstream 1596 true scaffold_4: 261303-262898 Capsella rubella
Carub.0004s0071 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 262399-262898 Capsella rubella
Carub.0004s0071 0.5kb downstream 0.5kb downstream 1596 true scaffold_4: 260803-262398 Capsella rubella
Carub.0004s0071 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 260803-261302 Capsella rubella
Carub.0004s0071 1.0kb upstream 1.0kb upstream 2096 true scaffold_4: 261303-263398 Capsella rubella
Carub.0004s0071 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 262399-263398 Capsella rubella
Carub.0004s0071 1.0kb downstream 1.0kb downstream 2096 true scaffold_4: 260303-262398 Capsella rubella
Carub.0004s0071 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 260303-261302 Capsella rubella
Carub.0004s0071 2.0kb upstream 2.0kb upstream 3096 true scaffold_4: 261303-264398 Capsella rubella
Carub.0004s0071 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 262399-264398 Capsella rubella
Carub.0004s0071 2.0kb downstream 2.0kb downstream 3096 true scaffold_4: 259303-262398 Capsella rubella
Carub.0004s0071 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 259303-261302 Capsella rubella
Carub.0004s0071 5.0kb upstream 5.0kb upstream 6096 true scaffold_4: 261303-267398 Capsella rubella
Carub.0004s0071 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 262399-267398 Capsella rubella
Carub.0004s0071 5.0kb downstream 5.0kb downstream 6096 true scaffold_4: 256303-262398 Capsella rubella
Carub.0004s0071 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 256303-261302 Capsella rubella
Carub.0004s0071 10.0kb upstream 10.0kb upstream 11096 true scaffold_4: 261303-272398 Capsella rubella
Carub.0004s0071 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 262399-272398 Capsella rubella
Carub.0004s0071 10.0kb downstream 10.0kb downstream 11096 true scaffold_4: 251303-262398 Capsella rubella
Carub.0004s0071 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 251303-261302 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379594 5261 Brassicaceae View MSA
123834253 5264 Brassicales-Malvales View MSA
124321937 5266 SBM View MSA
124250181 5268 Malvidae View MSA
124065859 5270 Rosid View MSA
123753688 5271 Pentapetalae View MSA
122793597 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain