Gene : Carub.0007s0421 C. rubella v1.1

Defline:  (1 of 3) K09250 - cellular nucleic acid-binding protein (CNBP) Genomic Order:  421
Name:  ? Carub.0007s0421 Secondary Identifier:  ? PAC:39234962

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0421 0.5kb upstream 0.5kb upstream 1289 true scaffold_7: 1597248-1598536 Capsella rubella
Carub.0007s0421 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1597248-1597747 Capsella rubella
Carub.0007s0421 0.5kb downstream 0.5kb downstream 1289 true scaffold_7: 1597748-1599036 Capsella rubella
Carub.0007s0421 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1598537-1599036 Capsella rubella
Carub.0007s0421 1.0kb upstream 1.0kb upstream 1789 true scaffold_7: 1596748-1598536 Capsella rubella
Carub.0007s0421 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1596748-1597747 Capsella rubella
Carub.0007s0421 1.0kb downstream 1.0kb downstream 1789 true scaffold_7: 1597748-1599536 Capsella rubella
Carub.0007s0421 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1598537-1599536 Capsella rubella
Carub.0007s0421 2.0kb upstream 2.0kb upstream 2789 true scaffold_7: 1595748-1598536 Capsella rubella
Carub.0007s0421 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1595748-1597747 Capsella rubella
Carub.0007s0421 2.0kb downstream 2.0kb downstream 2789 true scaffold_7: 1597748-1600536 Capsella rubella
Carub.0007s0421 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1598537-1600536 Capsella rubella
Carub.0007s0421 5.0kb upstream 5.0kb upstream 5789 true scaffold_7: 1592748-1598536 Capsella rubella
Carub.0007s0421 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1592748-1597747 Capsella rubella
Carub.0007s0421 5.0kb downstream 5.0kb downstream 5789 true scaffold_7: 1597748-1603536 Capsella rubella
Carub.0007s0421 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1598537-1603536 Capsella rubella
Carub.0007s0421 10.0kb upstream 10.0kb upstream 10789 true scaffold_7: 1587748-1598536 Capsella rubella
Carub.0007s0421 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1587748-1597747 Capsella rubella
Carub.0007s0421 10.0kb downstream 10.0kb downstream 10789 true scaffold_7: 1597748-1608536 Capsella rubella
Carub.0007s0421 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1598537-1608536 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365417 5261 Brassicaceae View MSA
123837622 5264 Brassicales-Malvales View MSA
124338789 5266 SBM View MSA
124250533 5268 Malvidae View MSA
124063967 5270 Rosid View MSA
123747748 5271 Pentapetalae View MSA
122791026 5272 Eudicot View MSA
122042982 5273 Angiosperm View MSA
121347174 5274 Embryophyte View MSA
123428407 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain