Gene : Carub.0003s1842 C. rubella v1.1
Genomic Order:  1842 Name:  ? Carub.0003s1842
Secondary Identifier:  ? PAC:39239232
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1842 0.5kb upstream 0.5kb upstream 3715 true scaffold_3: 6540112-6543826 Capsella rubella
Carub.0003s1842 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6543327-6543826 Capsella rubella
Carub.0003s1842 0.5kb downstream 0.5kb downstream 3715 true scaffold_3: 6539612-6543326 Capsella rubella
Carub.0003s1842 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6539612-6540111 Capsella rubella
Carub.0003s1842 1.0kb upstream 1.0kb upstream 4215 true scaffold_3: 6540112-6544326 Capsella rubella
Carub.0003s1842 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6543327-6544326 Capsella rubella
Carub.0003s1842 1.0kb downstream 1.0kb downstream 4215 true scaffold_3: 6539112-6543326 Capsella rubella
Carub.0003s1842 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6539112-6540111 Capsella rubella
Carub.0003s1842 2.0kb upstream 2.0kb upstream 5215 true scaffold_3: 6540112-6545326 Capsella rubella
Carub.0003s1842 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6543327-6545326 Capsella rubella
Carub.0003s1842 2.0kb downstream 2.0kb downstream 5215 true scaffold_3: 6538112-6543326 Capsella rubella
Carub.0003s1842 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6538112-6540111 Capsella rubella
Carub.0003s1842 5.0kb upstream 5.0kb upstream 8215 true scaffold_3: 6540112-6548326 Capsella rubella
Carub.0003s1842 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6543327-6548326 Capsella rubella
Carub.0003s1842 5.0kb downstream 5.0kb downstream 8215 true scaffold_3: 6535112-6543326 Capsella rubella
Carub.0003s1842 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6535112-6540111 Capsella rubella
Carub.0003s1842 10.0kb upstream 10.0kb upstream 13215 true scaffold_3: 6540112-6553326 Capsella rubella
Carub.0003s1842 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6543327-6553326 Capsella rubella
Carub.0003s1842 10.0kb downstream 10.0kb downstream 13215 true scaffold_3: 6530112-6543326 Capsella rubella
Carub.0003s1842 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6530112-6540111 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370104 5261 Brassicaceae View MSA
123799899 5264 Brassicales-Malvales View MSA
124297371 5266 SBM View MSA
124253098 5268 Malvidae View MSA
124063486 5270 Rosid View MSA
123751818 5271 Pentapetalae View MSA
122794753 5272 Eudicot View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain