Gene : Carub.0003s2972 C. rubella v1.1
Defline:  (1 of 1) PF01535//PF03161 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) Genomic Order:  2972
Name:  ? Carub.0003s2972 Secondary Identifier:  ? PAC:39240370
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2972 0.5kb upstream 0.5kb upstream 3249 true scaffold_3: 12525809-12529057 Capsella rubella
Carub.0003s2972 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 12528558-12529057 Capsella rubella
Carub.0003s2972 0.5kb downstream 0.5kb downstream 3249 true scaffold_3: 12525309-12528557 Capsella rubella
Carub.0003s2972 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 12525309-12525808 Capsella rubella
Carub.0003s2972 1.0kb upstream 1.0kb upstream 3749 true scaffold_3: 12525809-12529557 Capsella rubella
Carub.0003s2972 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 12528558-12529557 Capsella rubella
Carub.0003s2972 1.0kb downstream 1.0kb downstream 3749 true scaffold_3: 12524809-12528557 Capsella rubella
Carub.0003s2972 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 12524809-12525808 Capsella rubella
Carub.0003s2972 2.0kb upstream 2.0kb upstream 4749 true scaffold_3: 12525809-12530557 Capsella rubella
Carub.0003s2972 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 12528558-12530557 Capsella rubella
Carub.0003s2972 2.0kb downstream 2.0kb downstream 4749 true scaffold_3: 12523809-12528557 Capsella rubella
Carub.0003s2972 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 12523809-12525808 Capsella rubella
Carub.0003s2972 5.0kb upstream 5.0kb upstream 7749 true scaffold_3: 12525809-12533557 Capsella rubella
Carub.0003s2972 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 12528558-12533557 Capsella rubella
Carub.0003s2972 5.0kb downstream 5.0kb downstream 7749 true scaffold_3: 12520809-12528557 Capsella rubella
Carub.0003s2972 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 12520809-12525808 Capsella rubella
Carub.0003s2972 10.0kb upstream 10.0kb upstream 12749 true scaffold_3: 12525809-12538557 Capsella rubella
Carub.0003s2972 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 12528558-12538557 Capsella rubella
Carub.0003s2972 10.0kb downstream 10.0kb downstream 12749 true scaffold_3: 12515809-12528557 Capsella rubella
Carub.0003s2972 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 12515809-12525808 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371563 5261 Brassicaceae View MSA
123829131 5264 Brassicales-Malvales View MSA
124340278 5266 SBM View MSA
124239621 5268 Malvidae View MSA
124062766 5270 Rosid View MSA
123737498 5271 Pentapetalae View MSA
122787562 5272 Eudicot View MSA
122047377 5273 Angiosperm View MSA
121348028 5274 Embryophyte View MSA
123380709 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain