Gene : Carub.0003s0041 C. rubella v1.1
Defline:  (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Genomic Order:  41
Name:  ? Carub.0003s0041 Secondary Identifier:  ? PAC:39241777
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0041 0.5kb upstream 0.5kb upstream 3879 true scaffold_3: 121995-125873 Capsella rubella
Carub.0003s0041 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 125374-125873 Capsella rubella
Carub.0003s0041 0.5kb downstream 0.5kb downstream 3879 true scaffold_3: 121495-125373 Capsella rubella
Carub.0003s0041 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 121495-121994 Capsella rubella
Carub.0003s0041 1.0kb upstream 1.0kb upstream 4379 true scaffold_3: 121995-126373 Capsella rubella
Carub.0003s0041 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 125374-126373 Capsella rubella
Carub.0003s0041 1.0kb downstream 1.0kb downstream 4379 true scaffold_3: 120995-125373 Capsella rubella
Carub.0003s0041 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 120995-121994 Capsella rubella
Carub.0003s0041 2.0kb upstream 2.0kb upstream 5379 true scaffold_3: 121995-127373 Capsella rubella
Carub.0003s0041 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 125374-127373 Capsella rubella
Carub.0003s0041 2.0kb downstream 2.0kb downstream 5379 true scaffold_3: 119995-125373 Capsella rubella
Carub.0003s0041 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 119995-121994 Capsella rubella
Carub.0003s0041 5.0kb upstream 5.0kb upstream 8379 true scaffold_3: 121995-130373 Capsella rubella
Carub.0003s0041 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 125374-130373 Capsella rubella
Carub.0003s0041 5.0kb downstream 5.0kb downstream 8379 true scaffold_3: 116995-125373 Capsella rubella
Carub.0003s0041 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 116995-121994 Capsella rubella
Carub.0003s0041 10.0kb upstream 10.0kb upstream 13379 true scaffold_3: 121995-135373 Capsella rubella
Carub.0003s0041 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 125374-135373 Capsella rubella
Carub.0003s0041 10.0kb downstream 10.0kb downstream 13379 true scaffold_3: 111995-125373 Capsella rubella
Carub.0003s0041 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 111995-121994 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372022 5261 Brassicaceae View MSA
123800280 5264 Brassicales-Malvales View MSA
124297713 5266 SBM View MSA
124251703 5268 Malvidae View MSA
124070395 5270 Rosid View MSA
123748343 5271 Pentapetalae View MSA
122786233 5272 Eudicot View MSA
122045047 5273 Angiosperm View MSA
121350791 5274 Embryophyte View MSA
123424237 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain